Table 2 Assignment for mutating to dissimilar binding site residues according to the Miyata distance

From: Investigating whether deep learning models for co-folding learn the physics of protein-ligand interactions

Wild-Type

Mutation

Distance

TYR

GLY

4.08

TRP

GLY

5.13

LYS

GLY

3.54

ARG

GLY

3.58

VAL

ASP

3.40

LEU

ASP

4.10

ILE

ASP

3.98

MET

ASP

3.69

PHE

ASP

4.27

ALA

TRP

4.23

GLY

TRP

5.13

PRO

TRP

4.17

HIS

TRP

3.16

ASP

TRP

4.88

GLU

TRP

4.08

CYS

TRP

3.34

ASN

TRP

4.39

GLN

TRP

3.42

THR

TRP

3.50

SER

TRP

4.38