Fig. 3: Phylogenetic discordance and reticulate evolution in Artemisia.
a Tanglegram comparing maximum likelihood (ML) phylogenies from 202 low-copy nuclear genes (NLC dataset, left) and plastome dataset (right), with connecting lines matching sections (color-coded by subgenus). The full phylogeny with branch length and detailed support values is provided in Supplementary Figs. 2 and 6. b Split network based on uncorrected p-distances NLC dataset. c, d Optimal phylogenetic networks reconstructed from two different 22-taxa NLC datasets with maximum number of reticulations (hmax) = 4. Curved branches denote hybrid nodes annotated with inheritance probabilities; branch colors correspond to subgenera.
