Fig. 6: Comparison of spatial clustering and malignant cell distributions. | Nature Communications

Fig. 6: Comparison of spatial clustering and malignant cell distributions.

From: Systematic benchmarking of high-throughput subcellular spatial transcriptomics platforms across human tumors

Fig. 6

a Spatial clustering of COAD tissue sections profiled using four ST platforms and adjacent CODEX. Colors represent spatial clusters identified within each dataset. b Pearson correlation between cluster proportions in ST and CODEX data across spatial grids. Hollow circles indicate individual correlation values obtained under different grid sizes (n = 5). Data are presented as mean values +/− SEM. c. H&E staining and spatial localization of malignant cells at tumor boundary and core regions, as defined by unsupervised spatial clustering within each ST platform. Source data are provided as a Source Data file.

Back to article page