Table 1 Frequencies of the HFE c.845 G > A (C282Y) and c.187 C>G (H63D) variants in the UKB by population group

From: The landscape of hereditary haemochromatosis risk and diagnosis across the British Isles and Ireland

Group

N

c.845 G>A (p.Cys282Tyr)

c.187 C > G (p.His63Asp)

  

MAC

MAF

q2

one in

MAC

MAF

Genomically British

408,780

63,763

0.0780

0.00608

164

123,466

0.1510

German

2088

254

0.0608

0.00370

270

617

0.1477

French

801

80

0.0499

0.00249

401

285

0.1779

Polish

612

42

0.0343

0.00118

849

182

0.1487

Italian

808

31

0.0192

0.00037

2.7k

230

0.1423

Ashkenazi Jewish

2868

71

0.0124

0.00015

6.5k

724

0.1262

Afro-Caribbean

2171

34

0.0078

0.00006

16k

70

0.0161

Sri Lankan

654

3

0.0023

0.00001

190k

133

0.1017

British Indian

5317

23

0.0022

0.00000

213k

834

0.0784

British Pakistani

1645

4

0.0012

0.00000

676k

239

0.0726

Kenyan

1049

2

0.0010

0.00000

1 M

170

0.0810

East Asian

2244

2

0.0004

0.00000

5 M

134

0.0299

West African

1317

0

0.0000

0.00000

>6 M

15

0.0057

  1. The groups in Table 1 are ordered by decreasing MAF of p.Cys282Tyr. Genomically British were identified by UK Biobank (Data field 22006). Otherwise, data were taken from UKB volunteers either reporting birthplaces in Germany, France, Poland, Italy, Sri Lanka or Kenya, who matched the majority ancestry group from that nation using dbscan (Methods), or those self-declaring their ethnicity as Afro-Caribbean, British Indian, British Pakistani or West African. Ashkenazi Jewish and East Asian frequencies are taken from the UKB allele frequency browser, because this ancestry was not available through self-report in UKB and there were too few individuals born in any single East Asian nation, respectively. In this way, the major groups living in the UK (with >500 volunteers in the UKB) are represented.
  2. MAC minor allele count, MAF minor allele frequency, q2 predicted frequency of p.Cys282Tyr homozygotes, themajor risk genotype; ‘one in’ gives the ratio of people in each population group who carry the major risk genotype, k thousand, M million.