Fig. 2: Boxplots comparing the AUC scores distribution on the choice of using mean output pooling, summary-token pooling, or maximum pooling. | Nature Communications

Fig. 2: Boxplots comparing the AUC scores distribution on the choice of using mean output pooling, summary-token pooling, or maximum pooling.

From: Benchmarking DNA foundation models for genomic and genetic tasks

Fig. 2

We calculate AUC scores from all 52 binary sequence classification datasets included in this study. Boxplots show the median (center line), interquartile range (box = 25th–75th percentiles), and whiskers correspond to 1.5 × interquartile range. minima and maxima correspond to the whisker ends.

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