Table 2 Associations of ERVs with reproduction success
ERV | Contig | Position | AAF | OR | Up or down | p-value | Gene | Region |
|---|---|---|---|---|---|---|---|---|
enKoRV | JAOEJA010001224.1 | 3,086,484 | 0.04 | 0.03 | Down | 0.01 | - | intergenic |
phaCin-β | JAOEJA010001255.1 | 9,749,859 | 0.11 | 0.08 | Down | 0.01 | - | intergenic |
enKoRV | JAOEJA010001068.1 | 18,324,756 | 0.04 | 0.02 | Down | 0.02 | - | intergenic |
enKoRV | JAOEJA010000825.1 | 31,027,633 | 0.06 | 0.05 | Down | 0.02 | - | intergenic |
enKoRV | JAOEJA010000937.1 | 36,954,807 | 0.05 | 0.02 | Down | 0.02 | - | intergenic |
enKoRV | JAOEJA010000913.1 | 1,592,048 | 0.14 | 0.17 | Down | 0.02 | PPFIBP1 | upstream |
phaCin-β | JAOEJA010000073.1 | 54,044,707 | 0.03 | 0.02 | Down | 0.02 | - | intergenic |
enKoRV | JAOEJA010000005.1 | 355,168 | 0.05 | 0.06 | Down | 0.02 | JAM2, MRPL39 | upstream |
enKoRV | JAOEJA010000517.1 | 9,231,929 | 0.04 | 32.35 | Up | 0.03 | RAB13, NUP210, RPS27 | upstream |
phaCin-β | JAOEJA010000944.1 | 4,970,294 | 0.05 | 0.10 | Down | 0.03 | Vmn2r65 | upstream |
enKoRV | JAOEJA010000659.1 | 19,889,096 | 0.08 | 0.11 | Down | 0.03 | - | intergenic |
enKoRV | JAOEJA010000741.1 | 35,843,421 | 0.06 | 0.11 | Down | 0.03 | Two novel genes and ALDH1A3 | downstream |
enKoRV | JAOEJA010000741.1 | 23,466,054 | 0.05 | 0.11 | Down | 0.04 | - | intergenic |
enKoRV | JAOEJA010000548.1 | 25,140,727 | 0.05 | 0.04 | Down | 0.04 | - | intergenic |
enKoRV | JAOEJA010000889.1 | 6373,854 | 0.05 | 0.08 | Down | 0.04 | - | intergenic |
enKoRV | JAOEJA010000517.1 | 15,773,814 | 0.08 | 0.15 | Down | 0.04 | IGSF9 | intron |
enKoRV | JAOEJA010000824.1 | 30,792,507 | 0.07 | 0.13 | Down | 0.04 | Two novel genes and FAM71B | intron and upstream |
phaCin-β | JAOEJA010000825.1 | 40,974,068 | 0.04 | 25.38 | Up | 0.05 | - | intergenic |
