Table 3 Micronutrient pathway genes in little millet identified via GWAS and LSV-viz analyses
Little millet gene | Analysis | Arabidopsis/rice ortholog | Micronutrient element |
|---|---|---|---|
Psum.JK8.1r.2Ag029040 | LSV-viz | OsBMC | Fe, Mn, Cu |
Psum.JK8.1r.2Bg030570 | LSV-viz | OsBMC | Fe, Mn, Cu |
Psum.JK8.1r.3Ag000590 | LSV-viz | ZIP2 | Zn, Fe |
Psum.JK8.1r.3Ag002970 | LSV-viz | MYB2; MYB2 transcription factor | Fe, Cd, Zn, Co, Mo |
Psum.JK8.1r.3Ag002980 | LSV-viz | MYB2; MYB2 transcription factor | Fe, Cd, Zn, Co, Mo |
Psum.JK8.1r.3Ag037860 | LSV-viz | PMA1, PMA2; H + -transporting ATPase | Na |
Psum.JK8.1r.3Ag038080 | LSV-viz | SLC9A10_11; solute carrier family 9 (sodium/hydrogen exchanger), member 10/11 | Na |
Psum.JK8.1r.9Bg041540 | LSV-viz | SPT; serine palmitoyltransferase | Fe |
Psum.JK8.1r.9Bg042380 | LSV-viz | DMAS1; 3”-deamino-3”-oxonicotianamine reductase | Fe |
Psum.JK8.1r.5Bg015260 | SNP-GWAS | PP3R, CNB; serine/threonine-protein phosphatase 2B regulatory subunit | K |
Psum.JK8.1r.1Ag000230 | SNP-GWAS | AT2G21045 | As |
Psum.JK8.1r.2Ag013440 | SNP-GWAS | CPS4; syn-copalyl-diphosphate synthase | Fe |
