Table 2 New upregulated genes identified as co-expressed with SPI-1
Gene | Encoded product | KEGG Orthology (KO) | KO sub category |
|---|---|---|---|
flgH | Flagellar L-ring protein FlgH | Cellular processes | Cell motility |
hemM | Outer membrane lipoprotein LolB | Not Included in Pathway or Brite | Unclassified: signaling and cellular processes |
cheZ | Chemotaxis protein CheZ | Cellular processes | Cell motility |
fliC | Flagellin | Environmental information processing | Signal transduction |
sanA | Vancomycin resistance protein | Not included in pathway or brite | Poorly characterized |
SL1344_2272 | Undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF | Human diseases | Drug resistance: antimicrobial |
SL1344_3130 | Hypothetical protein | Not assigned | Not assigned |
yhcB | Conserved hypothetical protein | Not included in pathway or brite | Poorly characterized |
yhiQ | 16S rRNA (guanine1516-N2)-methyltransferase | Brite hierarchies | Protein families: genetic information processing |
SL1344_3757 | Hypothetical protein | Not assigned | Not assigned |
spf | Small regulatory RNA Spot 42 | Brite hierarchies | Protein families: genetic information processing |
