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ARID1A loss drives gastric signet ring cell carcinoma by regulating mucin production and secretion
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  • Published: 02 June 2026

ARID1A loss drives gastric signet ring cell carcinoma by regulating mucin production and secretion

  • Hongyu Liu1 na1,
  • Ailing Zhong1 na1,
  • Zhenghao Lu2,3 na1,
  • Limin Gao4 na1,
  • Mengsha Zhang1,
  • Jiaxin Li1,
  • Yingjie Wang1,
  • Yiyun Wang1,
  • Lanxin Zhang1,
  • Jiabo Zhang1,
  • Xiangyu Pan1,
  • Xuelan Chen1,
  • Jingyao Chen1,
  • Siyu He  ORCID: orcid.org/0009-0007-4350-42321,
  • Xinyuan Wang  ORCID: orcid.org/0000-0003-3621-81511,
  • Xudong Wan1,
  • Xintong Deng1,
  • Tingfa Peng5,
  • Jian Wang1,
  • Jiajia Du1,
  • Kun Yang2,
  • Kai Liu2,
  • Xinzu Chen  ORCID: orcid.org/0000-0002-7619-62442,
  • Xiaolong Chen2,
  • Zhe Feng6,
  • Baohong Wu1,
  • Jing Xu1,
  • Linyong Zhao2,
  • Weihan Zhang2,
  • Shengyong Yang  ORCID: orcid.org/0000-0001-5147-37461,
  • Yuan Wang  ORCID: orcid.org/0000-0002-6324-61341,
  • Lu Chen  ORCID: orcid.org/0000-0002-1083-97291,
  • Zhihong Xue1,
  • Chengjian Zhao1,
  • Lunzhi Dai  ORCID: orcid.org/0000-0002-3003-89101,
  • Feifei Na7,
  • Jiankun Hu2,
  • Yu Liu  ORCID: orcid.org/0000-0002-1193-78301 &
  • …
  • Chong Chen  ORCID: orcid.org/0000-0002-6787-04951,8 

Nature Communications (2026) Cite this article

We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Cancer models
  • Gastrointestinal cancer

Abstract

Signet ring cell carcinoma (SRCC) is a lethal malignancy with distinct histologic features, characterized by accumulated mucins in the cytoplasm which compress nuclei. Gastric SRCC is the most common SRCC whose incidence is increasing in recent years. The molecular mechanisms underlying the histopathology remain poorly understood. Here, we report that AT-rich interactive domain-containing protein 1 A (ARID1A), one of the most frequently mutated genes in gastric SRCC, functions as a bona fide tumor suppressor. Its loss, together with Trp53 and Pten loss, drives SRCC in mice. Mechanistically, Arid1a loss upregulates the expressions of mucins through the competing BRD9-containing ncBAF complex. And mucin secretion is impaired by the downregulation of Scin, a direct target of Arid1a in SRCC. Inhibition of Brd9 ameliorates the malignancy of SRCC. Thus, our study reveals dual roles of ARID1A in both mucin production and secretion, providing new mechanistic insights and potential therapeutic vulnerabilities in SRCC.

Acknowledgements

We thank Dr. Yuquan Wei for generous support. We thank all the CC-LY lab members and Fangfang Wang (Institute of Hematology, West China Hospital) for discussion and technical support. We thank the Core Facilities of West China Hospital and the Chengdu OrganoidMed Medical Laboratory for technical support.

Funding

This work was supported by the Noncommunicable Chronic Diseases-National Science and Technology Major Project (2023ZD0500500 [Y.L.]); the National Natural Science Foundation of China (T2221004 [C.C.], 82330087 [C.C.], 2024YFF0507400 [C.C.], 82130007 [Y.L.], 82170171 [C.C.], 82470188 [Y.L.], 82300186 [B.W.], 82500226 [J.X]); the Sichuan Science and Technology Program (2025NSFTD0030 [Y.L.], 2025ZNSFSC0047 [C.C.]); the Frontiers Medical Center, Tianfu Jincheng Laboratory Foundation (TFJC2023010004 [C.C.]); the Post-Doctor Research Project, West China Hospital, Sichuan University (2024HXBH179 [J.Z.], 2025HXBH025 [H.L.]); the China Postdoctoral Science Foundation (2023TQ0226 [B.W.]); the From 0 to 1 innovative research project of Sichuan University (2023SCUH0070 [Q.Z.]); Natural Science Foundation of Sichuan Province of China (2024NSFSC1696 [J.X]).

Author information

Author notes
  1. These authors contributed equally: Hongyu Liu, Ailing Zhong, Zhenghao Lu, Limin Gao.

Authors and Affiliations

  1. State Key Laboratory of Biotherapy and Cancer Center and National Clinical Research Center for Geriatrics, West China Hospital, Sichuan University, Chengdu, Sichuan, China

    Hongyu Liu, Ailing Zhong, Mengsha Zhang, Jiaxin Li, Yingjie Wang, Yiyun Wang, Lanxin Zhang, Jiabo Zhang, Xiangyu Pan, Xuelan Chen, Jingyao Chen, Siyu He, Xinyuan Wang, Xudong Wan, Xintong Deng, Jian Wang, Jiajia Du, Baohong Wu, Jing Xu, Shengyong Yang, Yuan Wang, Lu Chen, Zhihong Xue, Chengjian Zhao, Lunzhi Dai, Yu Liu & Chong Chen

  2. Department of Gastrointestinal Surgery and Laboratory of Gastric Cancer, State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China

    Zhenghao Lu, Kun Yang, Kai Liu, Xinzu Chen, Xiaolong Chen, Linyong Zhao, Weihan Zhang & Jiankun Hu

  3. Chengdu OrganoidMed Medical Laboratory, West China Health Valley, Chengdu, Sichuan, China

    Zhenghao Lu

  4. Department of Pathology, West China Hospital, Sichuan University, Chengdu, Sichuan, China

    Limin Gao

  5. Department of Gastroenterology, Armed Police Forces Hospital of Sichuan, Chengdu, Sichuan, China

    Tingfa Peng

  6. Department of Gastroenterology, West China Hospital, Sichuan University, Chengdu, Sichuan, China

    Zhe Feng

  7. Division of Thoracic Tumor Multimodality Treatment, Cancer Center, West China Hospital, Sichuan University, Chengdu, Sichuan, China

    Feifei Na

  8. Frontiers Medical Center, Tianfu Jincheng Laboratory, Chengdu, Sichuan, China

    Chong Chen

Authors
  1. Hongyu Liu
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  2. Ailing Zhong
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  3. Zhenghao Lu
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  5. Mengsha Zhang
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  6. Jiaxin Li
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  10. Jiabo Zhang
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  11. Xiangyu Pan
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  14. Siyu He
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  15. Xinyuan Wang
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  21. Kun Yang
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  22. Kai Liu
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  23. Xinzu Chen
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  24. Xiaolong Chen
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  25. Zhe Feng
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  26. Baohong Wu
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  27. Jing Xu
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  28. Linyong Zhao
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  29. Weihan Zhang
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  30. Shengyong Yang
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  31. Yuan Wang
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  32. Lu Chen
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  33. Zhihong Xue
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  34. Chengjian Zhao
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  36. Feifei Na
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  37. Jiankun Hu
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  38. Yu Liu
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  39. Chong Chen
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Corresponding authors

Correspondence to Feifei Na, Jiankun Hu, Yu Liu or Chong Chen.

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The authors declare no competing interests.

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Supplementary information

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Cite this article

Liu, H., Zhong, A., Lu, Z. et al. ARID1A loss drives gastric signet ring cell carcinoma by regulating mucin production and secretion. Nat Commun (2026). https://doi.org/10.1038/s41467-026-73933-0

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  • Received: 20 October 2024

  • Accepted: 23 May 2026

  • Published: 02 June 2026

  • DOI: https://doi.org/10.1038/s41467-026-73933-0

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