Extended Data Fig. 8: Imprinting profiles in different cell types of 5-DAP endosperm.
From: Multilayered epigenetic control of persistent and stage-specific imprinted genes in rice endosperm
a, Expression and log2 maternal bias (maternal/paternal) of persistent and 5-DAP-specific MEGs (left) and PEGs (right) in pseudo-bulk data sets of UMAP clusters. Left panels show hierarchical clustering of average expression patterns. Expression levels are represented by Z-scored TPM values. Right panels represent log2 maternal bias (maternal/paternal) for each imprinted gene. Gray color represents genes below the threshold of detectable expression. b, Bar plots showing the number of detectable MEGs and PEGs from pseudo-bulk data sets of UMAP clusters. Different colors represent different classes of imprinted genes: blue, persistent; green, 5-DAP-specific.
