Extended Data Fig. 6: Analysis of specific LTR-RTs families. | Nature Plants

Extended Data Fig. 6: Analysis of specific LTR-RTs families.

From: The near-complete genome assembly of hexaploid wild oat reveals its genome evolution and divergence with cultivated oats

Extended Data Fig. 6

a, Cluster analysis of transposable element (TE) families in three oat genomes. The pie chart represents the proportion of PAVs overlapped with repeat and non-repeat regions. b, The number and insertion time of specific LTR-RTs families in three oat genomes. c, GO term enrichment analysis of genes affected by specific TEs in the A. sterilis genome. d, Gene structures and expression of homologous SAM-MT genes (AVESA.00702a.r1.1Ag0146002, AVESA.00401a.r1.1Ag0188833, AVESA.00022a.r1.1A0151681, and AVESA.00010b.r1.1Ag1357780) in four oat genomes, comprising A. sterilis, Marvellous, Sanfensan, and Sang.

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