Fig. 2: The genomic and SNV analysis of Catellicoccus marimammalium.
From: The dynamics of microbiome and virome in migratory birds of southwest China
a The VFDB categories of the identified virulent factors in the genome of Catellicoccus marimammalium. b The gene expression of potential virulence factors in Catellicoccus marimammalium. The density chart shows the relative expression pattern of each VFDB term across all samples. The X axis represents the relative expression level of different terms. c Strain-level analysis of Catellicoccus marimammalium. ANI values (x axis) obtained from InStrain of all black-headed gull samples. Colors are assigned based on 99.9% ANI. Strains considered to be the same strain will be annotated with the same color. Six main clades are shown in different colors in the phylogenetic tree. Other metadata is indicated using cells of different colors. HY Hanyuan, LS Leshan, QH Qionghai, DY Deyang. d The genome annotation of Catellicoccus marimammalium. e The alteration of Catellicoccus marimammalium clades in black-headed gulls upon arrival and departure. f Distribution patterns of six main Catellicoccus marimammalium clades across different years.
