Fig. 6: Phylogenetic and recombination analysis of Rabbit hemorrhagic disease virus 2 (RHDV2). | npj Biofilms and Microbiomes

Fig. 6: Phylogenetic and recombination analysis of Rabbit hemorrhagic disease virus 2 (RHDV2).

From: Diverse virome and potential pathogens in five tick species from metropolis surroundings of Beijing and Tianjin, China

Fig. 6

a Phylogenetic relationship in the genus Lagovirus based on VP60 protein. b Phylogenetic relationship in the genus Lagovirus based on ORF1 protein except VP60. c Genome structure and recombination analysis of the RHDV2 strain. The horizontal axis represents the nt position of the genome, whereas the vertical axis represents the similarity to the two putative parental strains. The green plot indicates the closest major parent, EBHSV strain NC_002615, donor of the NS genes, whereas the orange plot indicates RHDV2 MT505389 strain, the closest minor parent, donor of the VP60 gene. A window size of 400 bp with a step size of 20 bp was used.

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