Table 1 Statistics of the genome assemblies
From: Medusozoan genomes inform the evolution of the jellyfish body plan
Scyphozoa | Cubozoa | ||
|---|---|---|---|
Species | A. aurita | M. virulenta | |
Geographical origin | Baltic sea (Atlantic) | Roscoff strain (Pacific) | Seto Inland Sea (Pacific) |
Genome size (Mbp) | 418 | 492 | 913 |
Heterozygosity (%) | 1.26 | 2.08 | 0.67 |
Assembly length (Mbp) | 377 | 429 | 952 |
Number of scaffolds | 2,710 | 7,744 | 4,538 |
Longest scaffold (Mbp) | 4.4 | 1.3 | 14.5 |
Scaffold N50 (Mbp) | 1.04 | 0.2 | 2.17 |
Number of contigs | 170,088 | 213,756 | 185,712 |
Contig N50 (bp) | 2,627 | 2,665 | 7,089 |
GC content (%) | 37.1 | 37.6 | 35.6 |
Repeats (%) | 44.67 | 44.03 | 37.41 |
Gap rate (%) | 6.63 | 14.45 | 11.87 |
Number of genes | 28,625 | 30,166 | 24,278 |
Mean gene length (bp) | 10,215 | 11,359 | 21,444 |
Mean exon length (bp) | 368 | 369 | 350 |
Mean intron length (bp) | 1,391 | 1,631 | 3,572 |
