Extended Data Fig. 8: Neanderthal desert region on chromosome 1 in Zlatý kůň and 5 high-coverage ancient genomes.
From: A genome sequence from a modern human skull over 45,000 years old from Zlatý kůň in Czechia
Each panel shows Neanderthal-shared variants in red and non-shared variants in gray. The orange line indicates the posterior decoding probabilities for Neanderthal ancestry from the hidden Markov model approach. The Neanderthal ancestry segment in Zlatý kůň (chr1:112696231-112855758) is supported by 17 Neanderthal shared variants. A short region, spanning only 6 bp (chr1:102812075-102812081) is called in Loschbour and contains four sites that are Neanderthal shared. The short length and high density of sites do not support a true Neanderthal origin.
