Fig. 4: Distributions and frequencies of inversions.
From: Chromosomal inversion polymorphisms shape the genomic landscape of deer mice
a, Locations of all P. maniculatus populations sampled (n = 13), labelled a–m; sample sizes given below. The five focal populations are highlighted (red). The approximate P. maniculatus range is highlighted in tan. b, Inversion genotype frequencies for each population: letters correspond to populations in a. Cladogram (left) shows relatedness (excluding inversion regions) between populations and two outgroups (P. leucopus, P. californicus); bootstrap values are shown. Inversion genotype frequencies across all P. maniculatus populations are shown at the top (grey box). Populations that deviate from HWE equilibrium are shown (n = 5, yellow outline). Missing data are shown as grey circles. Green and tan boxes highlight forest and prairie ecotypes, respectively. c, Distributions of three example inversions (inv7.2, inv14.0 and inv21.0) are shown, with inversion genotype frequencies for each population. Additional inversion distributions are provided in Extended Data Fig. 5. inv, inverted haplotype; std, standard haplotype.
