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Evolutionary genetics

The next generation of colour pattern genomics

Convolutional neural networks and genetic association analysis decode the evolution of colour pattern diversity and its underlying complex genetic architecture in the Trinidadian guppy.

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Fig. 1: A new approach to determining the genetic basis of colour pattern in the Trinidadian guppy.

References

  1. van’t Hof, A. E. et al. Nature 534, 102–105 (2016).

    Article  PubMed  Google Scholar 

  2. O’Brown, N. M., Summers, B. R., Jones, F. C., Brady, S. D. & Kingsley, D. M. eLife 4, e05290 (2015).

    Article  PubMed  PubMed Central  Google Scholar 

  3. Kratochwil, C. F. et al. Science 362, 457–460 (2018).

    Article  CAS  PubMed  Google Scholar 

  4. Orteu, A. & Jiggins, C. D. Nat. Rev. Genet. 21, 461–475 (2020).

    Article  CAS  PubMed  Google Scholar 

  5. Weller, H. I., Hiller, A. E., Lord, N. P. & Van Belleghem, S. M. Ecol. Lett. 27, e14378 (2024).

    Article  PubMed  Google Scholar 

  6. McCluskey, B. M., Liang, Y., Lewis, V. M., Patterson, L. B. & Parichy, D. M. Biol. Open 10, bio058814 (2021).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. van der Bijl, W. et al. Nat. Ecol. Evol. https://doi.org/10.1038/s41559-025-02781-w (2025).

  8. Reznick, D. & Endler, J. A. Evolution 36, 160–177 (1982).

    PubMed  Google Scholar 

  9. Houde, A. E. Proc. R. Soc. Lond. B Biol. Sci. 256, 125–130 (1994).

    Article  Google Scholar 

  10. Potter, T. et al. Science 380, 309–312 (2023).

    Article  CAS  PubMed  Google Scholar 

  11. Nanda, I. et al. Chromosoma 123, 373–383 (2014).

    Article  CAS  PubMed  Google Scholar 

  12. Tomaszkiewicz, M., Chalopin, D., Schartl, M., Galiana, D. & Volff, J.-N. BMC Genet. 15, 44 (2014).

    Article  PubMed  PubMed Central  Google Scholar 

  13. Fraser, B. A. et al. Genome Biol. Evol. 12, 1789–1805 (2020).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Elkin, J., Martin, A., Courtier-Orgogozo, V. & Santos, M. E. Biol. Rev. Camb. Philos. Soc. 98, 1250–1277 (2023).

    Article  PubMed  Google Scholar 

  15. Kratochwil, C. F. & Mallarino, R. Annu. Rev. Genet. 57, 135–156 (2023).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

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Correspondence to Nidal Karagic or Claudius F. Kratochwil.

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Karagic, N., Kratochwil, C.F. The next generation of colour pattern genomics. Nat Ecol Evol 9, 1554–1555 (2025). https://doi.org/10.1038/s41559-025-02816-2

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