Extended Data Fig. 4: Distribution of homologous recombination events and homoplastic SNP in pandemic clone (PC) strains.
From: Wave succession in the pandemic clone of Vibrio parahaemolyticus driven by gene loss
Phylogenetic trees based on non-recombined and non-homoplastic SNPs are shown on the left. In panel a, the top box summarizes the number and classification of recombination events (see legend at the top), while the bottom box displays their distribution across strains/nodes, represented by red bars. In panel b, bar colors indicate the status of SNPs or gaps, as defined in the legend at the bottom.
