Abstract
Phase engineering is of vital importance for determining the material functionalities and expanding the material library. However, the controllable and scalable phase transition of transition metal chalcogenides remains extremely challenging. The microscopic observation of the phase evolution pathway is an essential prerequisite for understanding the phase transition mechanism. Here we atomically observe a non-stoichiometric phase evolution process in large-scale superconducting PdTe2 films under heating through in situ scanning transmission electron microscopy. The unprecedented phase transition from PdTe2 to PdTe via atomic reconstruction is evidenced and theoretically verified by our machine learning molecular dynamics simulations. In particular, forming the intermediate state of PdTe2/PdTe heterostructure during the phase transition robustly generates giant-helicity-dependent terahertz emission due to inversion symmetry breaking. Our results not only provide insights into the atomic reconstruction in transition metal chalcogenides but also offer a general strategy for the fabrication of large-area transition metal monochalcogenide films and heterostructures, potentially applicable for various device applications.
This is a preview of subscription content, access via your institution
Access options
Access Nature and 54 other Nature Portfolio journals
Get Nature+, our best-value online-access subscription
$32.99 / 30 days
cancel any time
Subscribe to this journal
Receive 12 print issues and online access
$259.00 per year
only $21.58 per issue
Buy this article
- Purchase on SpringerLink
- Instant access to the full article PDF.
USD 39.95
Prices may be subject to local taxes which are calculated during checkout




Similar content being viewed by others
Data availability
The data that support the plots within this paper are available in the Article or its Supplementary Information. The other findings of this study are available from the corresponding authors upon request. Source data are provided with this paper.
References
Kappera, R. et al. Phase-engineered low-resistance contacts for ultrathin MoS2 transistors. Nat. Mater. 13, 1128–1134 (2014).
Cho, S. et al. Phase patterning for ohmic homojunction contact in MoTe2. Science 349, 625–628 (2015).
Keum, D. H. et al. Bandgap opening in few-layered monoclinic MoTe2. Nat. Phys. 11, 482–486 (2015).
Yu, Y. et al. Gate-tunable phase transitions in thin flakes of 1T-TaS2. Nat. Nanotechnol. 10, 270–276 (2015).
Wang, Y. et al. Structural phase transition in monolayer MoTe2 driven by electrostatic doping. Nature 550, 487–491 (2017).
Yu, Y. et al. High phase-purity 1T′-MoS2- and 1T′-MoSe2-layered crystals. Nat. Chem. 10, 638–643 (2018).
Zhang, F. et al. Electric-field induced structural transition in vertical MoTe2- and Mo1–xWxTe2-based resistive memories. Nat. Mater. 18, 55–61 (2018).
Zhao, X. et al. Engineering covalently bonded 2D layered materials by self-intercalation. Nature 581, 171–177 (2020).
Liu, X. et al. On-device phase engineering. Nat. Mater. 23, 1363–1369 (2024).
Lim, J. et al. Photoredox phase engineering of transition metal dichalcogenides. Nature 633, 83–89 (2024).
Chen, Y. et al. Phase engineering of nanomaterials. Nat. Rev. Chem. 4, 243–256 (2020).
Duerloo, K.-A. N., Li, Y. & Reed, E. J. Structural phase transitions in two-dimensional Mo- and W-dichalcogenide monolayers. Nat. Commun. 5, 4214 (2014).
Hart, J. L. et al. Emergent layer stacking arrangements in c-axis confined MoTe2. Nat. Commun. 14, 4803 (2023).
Li, W., Qian, X. & Li, J. Phase transitions in 2D materials. Nat. Rev. Mater. 6, 829–846 (2021).
Yang, R. et al. Intercalation in 2D materials and in situ studies. Nat. Rev. Chem. 8, 410–432 (2024).
Zhai, W. et al. Phase engineering of nanomaterials: transition metal dichalcogenides. Chem. Rev. 124, 4479–4539 (2024).
Li, Z. et al. 1T′-transition metal dichalcogenide monolayers stabilized on 4H-Au nanowires for ultrasensitive SERS detection. Nat. Mater. 23, 1355–1362 (2024).
Xing, Y. et al. Monitoring the formation of infinite-layer transition metal oxides through in situ atomic-resolution electron microscopy. Nat. Chem. 17, 66–73 (2024).
Modi, G. et al. Electrically driven long-range solid-state amorphization in ferroic In2Se3. Nature 635, 847–853 (2024).
Zhang, J. W. et al. Interlayer reconstruction phase transition in van der Waals materials. Nat. Mater. 24, 369–376 (2025).
Wu, Y. et al. Synthesis of superconducting two-dimensional non-layered PdTe by interfacial reactions. Nat. Synth. 1, 908–914 (2022).
Wu, S. Q. et al. In situ closing the van der Waals gap of two-dimensional materials. J. Am. Chem. Soc. 146, 28398–28406 (2024).
Cai, J. et al. On-chip synthesis of quasi-2D semimetals from multi-layer chalcogenides. Adv. Mater. 36, 2410815 (2024).
Song, S. et al. Wafer-scale production of patterned transition metal ditelluride layers for two-dimensional metal–semiconductor contacts at the Schottky-Mott limit. Nat. Electron. 3, 207–215 (2020).
Xu, X. L. et al. Seeded 2D epitaxy of large-area single-crystal films of the van der Waals semiconductor 2H MoTe2. Science 372, 195–200 (2021).
Zhou, Z. et al. Stack growth of wafer-scale van der Waals superconductor heterostructures. Nature 621, 499–505 (2023).
Chen, Z. et al. Defect-induced helicity dependent terahertz emission in Dirac semimetal PtTe2 thin films. Nat. Commun. 15, 2605 (2024).
Fei, F. et al. Nontrivial Berry phase and type-II Dirac transport in the layered material PdTe2. Phys. Rev. B 96, 041201(R) (2017).
Noh, H.-J. et al. Experimental realization of type-II Dirac fermions in a PdTe2 superconductor. Phys. Rev. Lett. 119, 016401 (2017).
Guo, Y. et al. Dynamically controllable terahertz electromagnetic interference shielding by small polaron responses in Dirac semimetal PdTe2 thin films. Adv. Funct. Mater. 34, 2407749 (2024).
Bahramy, M. S. et al. Ubiquitous formation of bulk Dirac cones and topological surface states from a single orbital manifold in transition-metal dichalcogenides. Nat. Mater. 17, 21–28 (2017).
Yang, X. P. et al. Coexistence of bulk-nodal and surface-nodeless Cooper pairings in a superconducting Dirac semimetal. Phys. Rev. Lett. 130, 046402 (2023).
Yadav, C. S., Ghosh, S. K., Kumar, P., Thamizhavel, A. & Paulose, P. L. Signature of point nodal superconductivity in the Dirac semimetal PdTe. Phys. Rev. B 110, 054515 (2024).
Zhao, C. et al. Multigap nodeless superconductivity in the topological semimetal PdTe. Phys. Rev. B 109, 174502 (2024).
Wang, F. et al. Ionic liquid gating induced self-intercalation of transition metal chalcogenides. Nat. Commun. 14, 4945 (2023).
Kristavchuk, A. V., Zabolotskaya, A. V., Voronin, M. V., Chareev, D. A. & Osadchii, E. G. Temperature dependence of tellurium fugacity for the kotulskite (PdTe)–merenskyite (PdTe2) equilibrium determined by the method of a solid-state galvanic cell. Phys. Chem. Minerals 48, 16 (2021).
Liu, C. et al. Two-dimensional superconductivity and topological states in PdTe2 thin films. Phys. Rev. Mater. 2, 094001 (2018).
Falson, J. Expanding the library of high-quality thin films. Nat. Mater. 24, 158–160 (2024).
Zeng, L. et al. Uncooled mid-infrared sensing enabled by chip-integrated low-temperature-grown 2D PdTe2 Dirac semimetal. Nano Lett. 23, 8241–8248 (2023).
Huang, M. et al. Stoichiometry-engineered phase transition in a two-dimensional binary compound. Nat. Commun. 16, 4162 (2025).
Akamatsu, T. et al. A van der Waals interface that creates in-plane polarization and a spontaneous photovoltaic effect. Science 372, 68–72 (2021).
Du, L. et al. Engineering symmetry breaking in 2D layered materials. Nat. Rev. Phys. 3, 193–206 (2021).
Ganichev, S. D. et al. Conversion of spin into directed electric current in quantum wells. Phys. Rev. Lett. 86, 4358–4361 (2001).
McIver, J. W., Hsieh, D., Steinberg, H., Jarillo-Herrero, P. & Gedik, N. Control over topological insulator photocurrents with light polarization. Nat. Nanotechnol. 7, 96–100 (2011).
Pan, Y. et al. Helicity dependent photocurrent in electrically gated (Bi1–xSbx)2Te3 thin films. Nat. Commun. 8, 1037 (2017).
Gao, M. et al. Tuning the transport behavior of centimeter-scale WTe2 ultrathin films fabricated by pulsed laser deposition. Appl. Phys. Lett. 111, 031906 (2017).
Chen, Y. et al. Observation of colossal topological Hall effect in noncoplanar ferromagnet Cr5Te6 thin films. Adv. Funct. Mater. 33, 2302984 (2023).
Hughbanks, T. & Hoffmann, R. Chains of trans-edge-sharing molybdenum octahedra-metal metal-bonding in extended systems. J. Am. Chem. Soc. 105, 3528–3537 (1983).
Dronskowski, R. & Blochl, P. E. Crystal orbital Hamilton populations (COHP): energy-resolved visualization of chemical bonding in solids based on density-functional calculations. J. Phys. Chem. 97, 8617–8624 (1993).
Wuttig, M. et al. The role of vacancies and local distortions in the design of new phase-change materials. Nat. Mater. 6, 122–128 (2007).
Kresse, G. & Furthmuller, J. Efficient iterative schemes for ab initio total-energy calculations using a plane-wave basis set. Phys. Rev. B 54, 11169–11186 (1996).
Kresse, G. & Furthmuller, J. Efficiency of ab-initio total energy calculations for metals and semiconductors using a plane-wave basis set. Comput. Mater. Sci. 6, 15–50 (1996).
Perdew, J. P. et al. Generalized gradient approximation made simple. Phys. Rev. Lett. 77, 3865–3868 (1997).
Grimme, S. et al. A consistent and accurate ab initio parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu. J. Chem. Phys. 132, 154104 (2010).
Grimme, S. et al. Effect of the damping function in dispersion corrected density functional theory. J. Comput. Chem. 32, 1456–1465 (2011).
Henkelman, G. et al. A climbing image nudged elastic band method for finding saddle points and minimum energy paths. J. Chem. Phys. 113, 9901 (2000).
Henkelman, G. et al. Improved tangent estimate in the nudged elastic band method for finding minimum energy paths and saddle points. J. Chem. Phys. 113, 9978 (2000).
Thompson, A. P. et al. LAMMPS—a flexible simulation tool for particle-based materials modeling at the atomic, meso, and continuum scales. Comput. Phys. Commun. 271, 108171 (2022).
Nosé, S. A unified formulation of the constant temperature molecular dynamics methods. J. Chem. Phys. 81, 511–519 (1984).
Hoover, W. G. Canonical dynamics: equilibrium phase-space distributions. Phys. Rev. A 31, 1695–1697 (1985).
Acknowledgements
This work was supported by the National Natural Science Foundation of China (grant numbers 62525406, T2394473, 624B2070 and 62274085), the National Key R&D Program of China (grant number 2022YFA1402404) and the Innovation Program for Quantum Science and Technology of China (grant number 2024ZD0301300). W.Z. acknowledges the National Natural Science Foundation of China (grant number U23A6015) and the CAS Project for Young Scientists in Basic Research (grant number YSBR-003). T.Y. acknowledges the National Key R&D Program of China (grant number 2022YFA1203900) and the National Natural Science Foundation of China (grant number 52031014). J.G. acknowledges the National Key R&D Program of China (grant number 2024YFA1409600) and the National Natural Science Foundation of China (grant number 12374253). F.S. acknowledges the National Natural Science Foundation of China (grant numbers 12025404, 92161201 and T2221003). Y.H. acknowledges the Key R&D Program of Jiangsu Province (grant number BE2023009-2) and the Natural Science Foundation of Jiangsu Province (grant number BK20243014). F.D. acknowledges the National Natural Science Foundation of China (grant number 22461160283) and the research program from Suzhou Laboratory (grant number SK-1502-2024-055). This work also benefitted from the resources and support from the Electron Microscopy Center at the University of Chinese Academy of Sciences.
Author information
Authors and Affiliations
Contributions
Xuefeng Wang conceived the study and proposed the strategy. Xuefeng Wang and R.Z. supervised the project. Z.C., R.X., K.X., X.L. and Y.Z. developed the PLD method, grew the samples and performed the XRD and X-ray photoelectron spectroscopy measurements. Z.C. and D.T. carried out the THz emission measurements. Z.C. and Y.H. performed the AFM measurement. J.-a.S. and W.Z. carried out the electron microscopy characterization. J.H., S.A. and T.Y. conducted the first-principles calculations. Y.C., J.G. and F.D. performed the machine learning MD simulations. Z.C., X.D., Z.D. and X.Z. fabricated the devices and performed the transport measurements. Z.C., G.L. and X.X. performed the Raman measurements. S.Z., F.F., L.H., Y.X., F.S., B.J., Xinran Wang, Y.S. and R.Z. contributed to the data analysis and discussion. Xuefeng Wang and Z.C. wrote the manuscript with input from all authors.
Corresponding authors
Ethics declarations
Competing interests
The authors declare no competing interests.
Peer review
Peer review information
Nature Materials thanks Soon-Yong Kwon and the other, anonymous, reviewer(s) for their contribution to the peer review of this work.
Additional information
Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Extended data
Extended Data Fig. 1 PLD growth of large-scale PdTe2 thin films.
a, Schematic illustration of PLD growth process of PdTe2 films on sapphire substrate. b, RHEED patterns obtained with different growth time. As the growth time increases, the RHEED pattern gradually evolves from bright dots to blurry stripes, and eventually to sharp stripes, indicating a layered growth mode.
Extended Data Fig. 2 Low-magnification STEM images of the phase transition from PdTe2 to PdTe.
a-c, The phase transition under the heating temperature at 20, 50, and 200 °C, respectively. The green and red dashed rectangles represent the dislocations near the substrate and the ordered PdTe phase, respectively. The scale bar is 2 nm. Notably, we can find that when the phase transition temperature increases, all dislocations become the ordered PdTe phase with a zigzag structure, which is consistent with the observation in Fig. 2b–f.
Extended Data Fig. 3 Thickness-dependent superconductivity of PdTe film.
a-g, R-T curves of the PdTe with the thickness ranging from 6 to 38 nm, respectively. TC is defined at 90% of the normal-state resistance. The data are normalized by the resistance at 7 K. h, Thickness-dependent TC of PdTe. The red dashed line represents the TC of the bulk PdTe.
Extended Data Fig. 4 Interface stability measurements.
a-c, The cross-sectional STEM images of the PdTe2/PdTe heterostructure under the heating temperature at 150 °C by the in situ STEM with the heating time of 20, 30, and 60 min, respectively. The red-colored rectangles indicate the PdTe phase. d, Transient THz waveforms of PdTe2/PdTe heterostructure under the linear polarized excitations. The heterostructure is obtained by annealing PdTe2 film at 300 °C for various time in the PLD system.
Extended Data Fig. 5 The multi-terminal electrode patterns for PdTe array on the Al2O3 substrate.
a, Schematic diagram of the fabrication procedure of the multi-terminal device. b, Photograph of a 2 × 2 multi-terminal device array. c, Optical image of multi-terminal PdTe device in (b). d, Various I-V curves of the multi-terminal device in (c), showing the perfect ohmic contact.
Extended Data Fig. 6 Thermally driven atomic reconstruction in PtTe2 thin film.
a, Schematic illustration of the thermally driven atomic reconstruction phase transition from PtTe2 to PtTe. The purple ball, yellow ball and red dashed circle represent Pt atom, Te atom, and VTe, respectively. b, Raman spectra of the PtTe2 film and the PtTe2/PtTe heterostructure annealed in the PLD system at 500 °C for 60 min. c,d, In situ STEM images of PtTe2 without heating and the partial phase transition from PtTe2 to PtTe under the heating temperature at 310 °C, respectively. The red-colored region in (d) indicates the PtTe phase. The scale bar is 2 nm. e,f, Magnified STEM images of the red and blue dashed rectangles in (c) and (d), respectively. The attached schematic atomic structures in (e) and (f) are PtTe2 and PtTe, respectively.
Supplementary information
Supplementary Information (download PDF )
Supplementary Figs. 1–31 and refs. 1 and 2.
Supplementary Video 1 (download GIF )
Thermally driven atomic reconstruction phase transition in PdTe2.
Supplementary Video 2 (download GIF )
MD simulation of the PdTe2/PdTe heterostructure under 700 K.
Supplementary Video 3 (download GIF )
MD simulation of the PdTe2/PdTe heterostructure under 500 K.
Supplementary Video 4 (download GIF )
MD simulation of the PdTe2/PdTe heterostructure with the VTe line defects in one layer far from the interface under 500 K.
Supplementary Video 5 (download GIF )
MD simulation of the PdTe2/PdTe heterostructure with the VTe line defects near the interface under 500 K.
Supplementary Video 6 (download GIF )
MD simulation of the PdTe2/PdTe heterostructure under 400 K.
Supplementary Video 7 (download GIF )
MD simulation of the PdTe2/PdTe heterostructure under 600 K.
Supplementary Video 8 (download GIF )
MD simulation of the PtTe2/PtTe heterostructure under 600 K.
Source data
Source Data Fig. 1 (download XLSX )
Source data for Fig. 1.
Source Data Fig. 3 (download XLSX )
Source data for Fig. 3.
Source Data Fig. 4 (download XLSX )
Source data for Fig. 4.
Source Data Extended Data Fig. 3 (download XLSX )
Source data for Extended Data Fig. 3.
Source Data Extended Data Fig. 4 (download XLSX )
Source data for Extended Data Fig. 4.
Source Data Extended Data Fig. 5 (download XLSX )
Source data for Extended Data Fig. 5.
Source Data Extended Data Fig. 6 (download XLSX )
Source data for Extended Data Fig. 6.
Rights and permissions
Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.
About this article
Cite this article
Chen, Z., Shi, Ja., Huang, J. et al. Large-area non-stoichiometric phase transition in transition metal chalcogenide films. Nat. Mater. 25, 573–580 (2026). https://doi.org/10.1038/s41563-025-02471-9
Received:
Accepted:
Published:
Version of record:
Issue date:
DOI: https://doi.org/10.1038/s41563-025-02471-9
This article is cited by
-
Reconstructing into a denser phase
Nature Materials (2026)


