Extended Data Fig. 3: AMG cluster variation in species and high occurrence AMG cluster distribution across different seasons.
From: Unravelling viral ecology and evolution over 20 years in a freshwater lake
a AMG cluster variation in viral species. The left bar plot represents the AMG cluster presence ratio pattern among all AMG cluster and species combinations. The x-axis indicates the size category of species and the number of AMG cluster and species combinations. The y-axis indicates the fractions of four quartiles of AMG cluster presence ratios. The right scatter plot represents the AMG cluster count fraction (the percentage of one AMG cluster being encountered among all AMG clusters within a species) to the mean AMG cluster presence ratio (the percentage that one AMG cluster appears among all members within a species) across all species. This scatter plot used the AMG cluster and species combinations of the 1st quartile (75-100%) of AMG cluster presence ratio category (the highest presence ratio) with the species size in the 4th quartile (the largest species size), which was shown as the connection by dash lines. High occurrence AMG clusters (distributed > 400 metagenomes) were colored red, and other AMG clusters were colored green. b Seasonal distribution of high occurrence AMG clusters (distributed > 400 metagenomes)) across metagenomes. The percentage indicates the AMG cluster containing metagenome number over the total metagenome number in each season.
