Extended Data Fig. 5: Phylogenetic analyses and site-exclusion treatment of the S150 dataset for 411 Asgard archaeal taxa and 14 eukaryotic taxa.
From: Deep origin of eukaryotes outside Heimdallarchaeia within Asgardarchaeota
a, The maximum likelihood phylogenomic analysis based on the S150 dataset (32,277 sites, 150 concatenated proteins, 425 taxa). The trees were inferred using IQ-TREE under the LG + C60 + F + G + PMSF model. Bootstrap support values ≥ 95% are represented by black dots. The scale bar denotes the average expected number of substitutions per site. b, Evolution of ultrafast bootstrap support for the monophyly of either eukaryotes and Heimdallarchaeia (EHeim, red line) or the monophyly of eukaryotes and Hodarchaeales (EHod, blue line), in the phylogenies inferred from the S150 dataset. The trees were inferred using IQ-TREE under the LG + C60 + F + G + PMSF model.
