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Photocatalytic oxygen-atom transmutation of oxetanes

Abstract

Non-aromatic heterocycles and carbocycles form the skeleton of countless bioactive and functional molecules1,2. Of note, four-membered saturated cyclic molecules such as azetidines, thietanes and cyclobutanes have garnered increasing attention in medicinal chemistry3,4,5,6,7. These molecules often have physicochemical properties relevant to drug discovery: potency, stability, metabolic stability and target specificity3. The replacement of oxygen atoms in readily available oxetanes would offer a direct route to a variety of these cyclic pharmacophores, yet such atom swapping has been rarely reported for non-aromatic molecules. Here we report a general photocatalytic strategy that selectively substitutes the oxygen atom of an oxetane with a nitrogen-based, sulfur-based or carbon-based moiety, transforming it into a diverse range of saturated cyclic building blocks in a single operation. This atom-swapping method exhibits high functional group compatibility and is applicable to late-stage functionalization, substantially simplifying the synthesis of pharmaceuticals and complex drug analogues that would otherwise require multistep routes. Mechanistic investigations unveil insights on the origin of chemoselectivity that allows the endocyclic oxygen atom to react preferentially to generate an acyclic dihalide intermediate, which then undergoes efficient ring reconstruction in the presence of a nucleophilic species.

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Fig. 1: Synthetic logic based on atomic replacement of oxygen in oxetanes.
Fig. 2: Mechanistic hypothesis and studies.
Fig. 3: Reaction scope of O-to-N swap.
Fig. 4: Extension to other O-atom transmutations.
Fig. 5: Application to late-stage functionalization and complex molecule synthesis.

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Data availability

Crystallographic data are available free of charge from the Cambridge Crystallographic Data Centre under reference nos. CCDC-2446264 (23), CCDC-2446104 (49), CCDC-2446091 (51), CCDC-2446094 (61), CCDC-2446107 (66) and CCDC-2446108 (67). All other data are available in the main text or the Supplementary information.

References

  1. Taylor, R. D., MacCoss, M. & Lawson, A. D. G. Rings in drugs. J. Med. Chem. 57, 5845–5859 (2014).

    Article  CAS  PubMed  Google Scholar 

  2. Marson, C. M. Saturated heterocycles with applications in medicinal chemistry. Adv. Heterocycl. Chem. 121, 13–33 (2017).

    Article  CAS  Google Scholar 

  3. Bauer, M. R. et al. Put a ring on it: application of small aliphatic rings in medicinal chemistry. RSC Med. Chem. 12, 448–471 (2021).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Parmar, D. R. et al. Azetidines of pharmacological interest. Arch. Pharm. 354, e2100062 (2021).

    Article  Google Scholar 

  5. Francisco, K. R. & Ballatore, C. Thietanes and derivatives thereof in medicinal chemistry. Curr. Top. Med. Chem. 22, 1219–1234 (2022).

    Article  CAS  PubMed  Google Scholar 

  6. van der Kolk, M. R., Janssen, M. A. C. H., Rutjes, F. P. J. T. & Blanco-Ania, D. Cyclobutanes in small-molecule drug candidates. ChemMedChem 17, e202200020 (2022).

    Article  PubMed  PubMed Central  Google Scholar 

  7. Rojas, J. J. & Bull, J. A. Oxetanes in drug discovery campaigns. J. Med. Chem. 66, 12697–12709 (2023).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Malarney, K. P., KC, S. & Schmidt, V. A. Recent strategies used in the synthesis of saturated four-membered heterocycles. Org. Biomol. Chem. 19, 8425–8441 (2021).

    Article  CAS  PubMed  Google Scholar 

  9. Villar, H., Frings, M. & Bolm, C. Ring closing enyne metathesis: a powerful tool for the synthesis of heterocycles. Chem. Soc. Rev. 36, 55–66 (2007).

    Article  CAS  PubMed  Google Scholar 

  10. Li, C.-L. & Liu, R.-S. Synthesis of heterocyclic and carbocyclic compounds via alkynyl, allyl, and propargyl organometallics of cyclopentadienyl iron, molybdenum, and tungsten complexes. Chem. Rev. 100, 3127–3161 (2000).

    Article  CAS  PubMed  Google Scholar 

  11. Spatola, E., Frateloreto, F., Giudice, D. D., Olivo, G. & Stefano, S. D. Cyclization reactions in confined space. Curr. Opin. Colloid Interface Sci. 64, 101680 (2023).

    Article  CAS  Google Scholar 

  12. Tang, K., Wang, S., Gao, W., Song, Y. & Yu, B. Harnessing the cyclization strategy for new drug discovery. Acta Pharm. Sin. B 12, 4309–4326 (2022).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  13. Lou, Y. Sulfonamido derivatives as cyclin-dependent kinase 2 inhibitors. US patent US20230303509 A1 (2023).

  14. Jurczyk, J. et al. Single-atom logic for heterocycle editing. Nat. Synth. 1, 352–364 (2022).

    Article  CAS  PubMed  PubMed Central  ADS  Google Scholar 

  15. Paschke, A.-S. et al. Carbon-to-nitrogen atom swap enables direct access to benzimidazoles from drug-like indoles. Nat. Chem. 17, 1750–1756 (2025).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  16. Wu, F.-P. et al. Nitrogen-to-functionalized carbon atom transmutation of pyridine. Chem. Sci. 15, 15205–15211 (2024).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Kim, D. et al. Photocatalytic furan-to-pyrrole conversion. Science 386, 99–105 (2024).

    Article  CAS  PubMed  ADS  Google Scholar 

  18. Woo, J., Stein, C., Christian, A. H. & Levin, M. D. Carbon-to-nitrogen single-atom transmutation of azaarenes. Nature 623, 77–82 (2023).

    Article  CAS  PubMed  PubMed Central  ADS  Google Scholar 

  19. Lyu, H., Kevlishvili, I., Yu, X., Liu, P. & Dong, G. Boron insertion into alkyl ether bonds via zinc/nickel tandem catalysis. Science 372, 175–182 (2021).

    Article  CAS  PubMed  ADS  Google Scholar 

  20. Nogi, K. & Yorimitsu, H. Aromatic metamorphosis: conversion of an aromatic skeleton into a different ring system. Chem. Commun. 53, 4055–4065 (2017).

    Article  CAS  Google Scholar 

  21. Bhanuchandra, M., Murakami, K., Vasu, D., Yorimitsu, H. & Osuka, A. Transition-metal-free synthesis of carbazoles and indoles by an SNAr-based “aromatic metamorphosis” of thiaarenes. Angew. Chem. Int. Ed. 54, 10234–10238 (2015).

    Article  CAS  Google Scholar 

  22. Chan-Penebre, E. et al. A selective inhibitor of PRMT 5 with in vivo and in vitro potency in MCL models. Nat. Chem. Biol. 11, 432–437 (2015).

    Article  CAS  PubMed  Google Scholar 

  23. Shen, Y. et al. Discovery of first-in-class protein arginine methyltransferase 5 (PRMT5) degraders. J. Med. Chem. 63, 9977–9989 (2020).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  24. Gadekar, P. K. et al. Design, synthesis and biological evaluation of novel azaspiro analogs of linezolid as antibacterial and antitubercular agents. Eur. J. Med. Chem. 122, 475–487 (2016).

    Article  CAS  PubMed  Google Scholar 

  25. Ahmad, S. et al. Synthesis and antiobesity properties of 6-(4-chlorophenyl)-3-(4-((3,3-difluoro-1-hydroxycyclobutyl)methoxy)-3-methoxyphenyl)thieno[3,2-d]pyrimidin-4(3H)-one (BMS-814580): a highly efficacious melanin concentrating hormone receptor 1 (MCHR1) inhibitor. J. Med. Chem. 59, 8848–8858 (2016).

    Article  CAS  PubMed  Google Scholar 

  26. Liu, F. et al. Discovery of an in vivo chemical probe of the lysine methyltransferases G9a and GLP. J. Med. Chem. 56, 8931–8942 (2013).

    Article  CAS  PubMed  ADS  Google Scholar 

  27. Dai, C., Narayanam, J. M. R. & Stephenson, C. R. J. Visible-light-mediated conversion of alcohols to halides. Nat. Chem. 3, 140–145 (2011).

    Article  CAS  PubMed  Google Scholar 

  28. Benazza, M., Uzan, R., Beaupère, D. & Demailly, G. Direct regioselective chlorination of unprotected hexitols and pentitols by Vilsmeier and Haack’s salt. Tetrahedron Lett. 33, 4901–4904 (1992).

    Article  CAS  Google Scholar 

  29. Penczek, S. & Kubisa, P. in Comprehensive Polymer Science and Supplements (eds Allen, G. & Bevington, J. C.) 751–786 (Pergamon, 1989).

  30. Sander, M. Thietanes. Chem. Rev. 66, 341–353 (1966).

    Article  CAS  Google Scholar 

  31. Liang, Y. & Demarest, K. T. GPR40 agonists in anti-diabetic drug combinations. US patent US20170290800 A1 (2017).

  32. Davis, L. O. Recent developments in the synthesis and applications of pyrazolidines. A review. Org. Prep. Proced. Int. 45, 437–464 (2013).

    Article  CAS  Google Scholar 

  33. Berthet, M., Cheviet, T., Dujardin, G., Parrot, I. & Martinez, J. Isoxazolidine: a privileged scaffold for organic and medicinal chemistry. Chem. Rev. 116, 15235–15283 (2016).

    Article  CAS  PubMed  Google Scholar 

  34. Felding, J., Nielsen, S. F., Larsen, J. C. H. & Babu, B. R. Novel phosphodiesterase inhibitors. International patent WO2008104175 A2 (2008).

  35. Last, S. J., Raboisson, P. J.-M. B., Rombouts, G., Vandyck, K. & Verschueren, W. G. Sulfamoyl-arylamides and the use thereof as medicaments for the treatment of hepatitis B. International patent WO2014033176 A1 (2014).

  36. Malashchuk, A., Chernykh, A. V., Dobrydnev, A. V. & Grygorenko, O. O. Fluorine-labelled spiro[3.3]heptane-derived building blocks: is single fluorine the best? Eur. J. Org. Chem. 2021, 4897–4910 (2021).

    Article  CAS  Google Scholar 

  37. Olifir, O. S. et al. Multigram synthesis of advanced 6,6-difluorospiro[3.3]heptane-derived building blocks. Eur. J. Org. Chem. 2021, 6541–6550 (2021).

    Article  CAS  Google Scholar 

  38. Miao, L. et al. Discovery of new difluorocyclobutyl derivatives as effective glucagon-like peptide-1 receptor agonists with reduced hERG inhibitory activities. J. Med. Chem. 68, 7662–7692 (2025).

    Article  CAS  PubMed  Google Scholar 

  39. Lu, G. et al. Novel aza-oxo-indoles for the treatment and prophylaxis of respiratory syncytial virus infection. International patent WO2015022263 A1 (2015).

Download references

Acknowledgements

This research was supported by the U.S. Air Force Office of Scientific Research: FA2386-25-1-4031 (M.J.K.), the Ministry of Education of Singapore Academic Research Fund Tier 1: A-8001693-00-00 (M.J.K.), National University of Singapore Foresight Grant: A-8002845-00-00, A-8002845-01-00, A-8002845-02-00 (M.J.K.), National Research Foundation, Prime Minister’s Office, Singapore under the NRF Investigatorship Programme: NRF-NRFI10-2024-0009 (M.J.K.), Novartis Early Career Award in Chemistry Unrestricted Grant: E-143-00-0072-01 (M.J.K.), the Chinese University of Hong Kong (CUHK) Vice-Chancellor Early Career Professorship Scheme Research Startup Fund: 4933634 (X.Z.) and Research Startup Matching Support: 5501779 (X.Z.). I. I. Roslan assisted with X-ray crystallographic measurements.

Author information

Authors and Affiliations

Authors

Contributions

M.J.K. and Y.-Q.Z. conceived the work. Y.-Q.Z. and S.-H.L. conducted the optimization, reaction scope and mechanistic studies. X.Z. designed and performed the DFT studies. M.J.K. directed the research and wrote the manuscript, with revisions provided by the other authors.

Corresponding authors

Correspondence to Xinglong Zhang or Ming Joo Koh.

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Extended data figures and tables

Extended Data Fig. 1 DFT-computed energetics of key reaction barriers and intermediates.

Values in parentheses indicate relative free energies in kcal mol−1 referenced to intermediate I.

Extended Data Fig. 2 Further studies in O-to-N swap with complex amines.

L-Phenylalanine methyl ester, mexiletine and oseltamivir underwent reaction with 8 to give the corresponding azetidine products. Ac, acetyl.

Extended Data Fig. 3 Previously reported synthetic routes to advanced drug intermediates.

In past protocols, extensive functional group interconversions, redox manipulations and protecting group strategies were necessary to access medicinally relevant building blocks 79 and 2. Ms, mesyl.

Supplementary information

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This file contains Supplementary Information.

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Zhang, YQ., Li, SH., Zhang, X. et al. Photocatalytic oxygen-atom transmutation of oxetanes. Nature 647, 906–912 (2025). https://doi.org/10.1038/s41586-025-09723-3

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