Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Article
  • Published:

Myriad aryne derivatives from carboxylic acids

Abstract

Densely substituted aromatic rings are ubiquitous in pharmaceuticals and agrochemicals1. For making aromatic molecules, aryne intermediates have synthetic potential that rivals most functional groups2. They readily react with nucleophiles, participate in pericyclic reactions and activate inert σ-bonds. Despite their potential, arynes are used at present by a specialized community for mainly niche applications. The lack of widespread adoption of arynes is due to the undesirable means to generate them. Here we report the design of an aryne precursor to overcome this prohibitive barrier. Readily available carboxylic acids are derivatized in a single step to a make a precursor that is then activated by blue light or by heat. Dozens of previously unknown aminated arynes, including pyridynes, are generated in this work, opening the door to drug discovery using aryne intermediates. We foresee that future development of this precursor platform will allow even more decorated arynes to be accessed, further expanding the reach of aryne chemistry.

This is a preview of subscription content, access via your institution

Access options

Buy this article

USD 39.95

Prices may be subject to local taxes which are calculated during checkout

Fig. 1: Synthetic potential of the aryne functional group, problems with its widespread adoption and our solution.
Fig. 2: Mechanistic investigation of the field effect on aryne generation.
Fig. 3: Aryne precursor synthesis, derivatization and activation.
Fig. 4: Expansion of synthetic utility.
Fig. 5: Photolytic activation.

Similar content being viewed by others

Data availability

All data are available in the text or Supplementary Information. Crystal structures can be found in the Cambridge Crystallographic Data Centre under accession codes 24102372410238Source data are provided with this paper.

References

  1. Nilova, A., Campeau, L.-C., Sherer, E. C. & Stuart, D. R. Analysis of benzenoid substitution patterns in small molecule active pharmaceutical ingredients. J. Med. Chem. 63, 13389–13396 (2020).

    Article  PubMed  CAS  Google Scholar 

  2. Shi, J., Li, L. & Li, Y. o-Silylaryl triflates: a journey of Kobayashi aryne precursors. Chem. Rev. 121, 3892–4044 (2021).

    Article  PubMed  CAS  Google Scholar 

  3. Roberts, J. D., Simmons, H. E., Carlsmith, L. A. & Vaughan, C. W. Rearrangement in the reaction of chlorobenzene-1-C14 with potassium amide1. J. Am. Chem. Soc. 75, 3290–3291 (1953).

    Article  ADS  CAS  Google Scholar 

  4. Kim, N., Choi, M., Suh, S.-E. & Chenoweth, D. M. Aryne chemistry: generation methods and reactions incorporating multiple arynes. Chem. Rev. 124, 11435–11522 (2024).

    Article  PubMed  CAS  Google Scholar 

  5. Medina, J. M., Mackey, J. L., Garg, N. K. & Houk, K. N. The role of aryne distortions, steric effects, and charges in regioselectivities of aryne reactions. J. Am. Chem. Soc. 136, 15798–15805 (2014).

    Article  ADS  PubMed  PubMed Central  CAS  Google Scholar 

  6. Sundalam, S. K., Nilova, A., Seidl, T. L. & Stuart, D. R. A selective C−H deprotonation strategy to access functionalized arynes by using hypervalent iodine. Angew. Chem. Int. Ed. 55, 8431–8434 (2016).

    Article  CAS  Google Scholar 

  7. Nilova, A., Metze, B. & Stuart, D. R. Aryl(TMP)iodonium tosylate reagents as a strategic entry point to diverse aryl intermediates: selective access to arynes. Org. Lett. 23, 4813–4817 (2021).

    Article  PubMed  CAS  Google Scholar 

  8. Roberts, R. A., Metze, B. E., Nilova, A. & Stuart, D. R. Synthesis of arynes via formal dehydrogenation of arenes. J. Am. Chem. Soc. 145, 3306–3311 (2023).

    Article  ADS  PubMed  CAS  Google Scholar 

  9. Smith, O. et al. Harnessing triaryloxonium ions for aryne generation. Nat. Synth. 3, 58–66 (2024).

    Article  ADS  CAS  Google Scholar 

  10. Sullivan, J. M. Explosion during preparation of benzenediazonium-2-carboxylate hydrochloride. J. Chem. Educ. 48, 419 (1971).

    Article  CAS  Google Scholar 

  11. Gann, A. W. et al. A photoinduced, benzyne click reaction. Org. Lett. 16, 2003–2005 (2014).

    Article  PubMed  CAS  Google Scholar 

  12. Maki, Y., Furuta, T., Kuzuya, M. & Suzuki, M. Photochemistry of o-nitrobenzaldehyde N-acetyl-N-alkylhydrazones resulting in the formation of benzyne. J. Chem. Soc. Chem. Commun. https://doi.org/10.1039/C39750000616 (1975).

  13. Goti, G., Manal, K., Sivaguru, J. & Dell’Amico, L. The impact of UV light on synthetic photochemistry and photocatalysis. Nat. Chem. 16, 684–692 (2024).

    Article  PubMed  CAS  Google Scholar 

  14. Yoshida, S., Nakamura, Y., Uchida, K., Hazama, Y. & Hosoya, T. Aryne relay chemistry en route to aminoarenes: synthesis of 3-aminoaryne precursors via regioselective silylamination of 3-(triflyloxy)arynes. Org. Lett. 18, 6212–6215 (2016).

    Article  PubMed  CAS  Google Scholar 

  15. Kennedy, S. H., Dherange, B. D., Berger, K. J. & Levin, M. D. Skeletal editing through direct nitrogen deletion of secondary amines. Nature 593, 223–227 (2021).

    Article  ADS  PubMed  CAS  Google Scholar 

  16. Fazekas, T. J. et al. Diversification of aliphatic C–H bonds in small molecules and polyolefins through radical chain transfer. Science 375, 545–550 (2022).

    Article  ADS  PubMed  PubMed Central  CAS  Google Scholar 

  17. Qin, T. et al. A general alkyl–alkyl cross-coupling enabled by redox-active esters and alkylzinc reagents. Science 352, 801–805 (2016).

    Article  ADS  PubMed  PubMed Central  CAS  Google Scholar 

  18. Johnston, C. P., Smith, R. T., Allmendinger, S. & MacMillan, D. W. C. Metallaphotoredox-catalysed sp3sp3 cross-coupling of carboxylic acids with alkyl halides. Nature 536, 322–325 (2016).

    Article  ADS  PubMed  PubMed Central  CAS  Google Scholar 

  19. Zhang, L., DeMuynck, B. M., Paneque, A. N., Rutherford, J. E. & Nagib, D. A. Carbene reactivity from alkyl and aryl aldehydes. Science 377, 649–654 (2022).

    Article  ADS  PubMed  PubMed Central  CAS  Google Scholar 

  20. Nguyen, K. N. M. et al. Harnessing carbene polarity: unified catalytic access to donor, neutral, and acceptor carbenes. Science 389, 183–189 (2025).

    Article  ADS  PubMed  CAS  Google Scholar 

  21. Beringer, F. M. & Huang, S. J. Effects of substituents on the rearrangement of 2-aryl iodoniobenzoates and their cleavage to benzyne1,2. J. Org. Chem. 29, 1637–1638 (1964).

    Article  CAS  Google Scholar 

  22. Beringer, F. M. & Huang, S. J. Rearrangement and cleavage of 2-aryliodoniobenzoates. Trapping agents for benzyne1-3. J. Org. Chem. 29, 445–448 (1964).

    Article  CAS  Google Scholar 

  23. Le Goff, E. Aprotic generation of benzyne from diphenyliodonium-2-carboxylate. J. Am. Chem. Soc. 84, 3786–3786 (1962).

    Article  ADS  Google Scholar 

  24. Brown, D. G. & Boström, J. Analysis of past and present synthetic methodologies on medicinal chemistry: where have all the new reactions gone?. J. Med. Chem. 59, 4443–4458 (2016).

    Article  PubMed  CAS  Google Scholar 

  25. Baur, A., Bustin, K. A., Aguilera, E., Petersen, J. L. & Hoover, J. M. Copper and silver benzoate and aryl complexes and their implications for oxidative decarboxylative coupling reactions. Org. Chem. Front. 4, 519–524 (2017).

    Article  CAS  Google Scholar 

  26. Crovak, R. A. & Hoover, J. M. A predictive model for the decarboxylation of silver benzoate complexes relevant to decarboxylative coupling reactions. J. Am. Chem. Soc. 140, 2434–2437 (2018).

    Article  ADS  PubMed  CAS  Google Scholar 

  27. Hansch, C., Leo, A. & Taft, R. W. A survey of Hammett substituent constants and resonance and field parameters. Chem. Rev. 91, 165–195 (1991).

    Article  CAS  Google Scholar 

  28. Linde, E., Bulfield, D., Kervefors, G., Purkait, N. & Olofsson, B. Diarylation of N- and O-nucleophiles through a metal-free cascade reaction. Chem 8, 850–865 (2022).

    Article  CAS  Google Scholar 

  29. Seidl, T. L., Sundalam, S. K., McCullough, B. & Stuart, D. R. Unsymmetrical aryl(2,4,6-trimethoxyphenyl)iodonium salts: one-pot synthesis, scope, stability, and synthetic studies. J. Org. Chem. 81, 1998–2009 (2016).

  30. Mironova, I. A., Noskov, D. M., Yoshimura, A., Yusubov, M. S. & Zhdankin, V. V. Aryl-, akynyl-, and alkenylbenziodoxoles: synthesis and synthetic applications. Molecules 28, 2136 (2023).

  31. Yusubov, M. S., Yusubova, R. Y., Nemykin, V. N. & Zhdankin, V. V. Preparation and X-ray structural study of 1-arylbenziodoxolones. J. Org. Chem. 78, 3767–3773 (2013).

    Article  PubMed  CAS  Google Scholar 

  32. Swain, C. G. & Lupton, E. C. Field and resonance components of substituent effects. J. Am. Chem. Soc. 90, 4328–4337 (1968).

    Article  ADS  CAS  Google Scholar 

  33. Maiti, M., Sinha, S., Deb, C., De, A. & Ganguly, T. Photophysics of 4-methoxy-benzo[b]thiophene in different environments. Its role in non-radiative transitions both as an electron and as an energy donor. J. Lumin. 82, 259–276 (1999).

    Article  CAS  Google Scholar 

  34. Mei, T.-S., Giri, R., Maugel, N. & Yu, J.-Q. PdII-catalyzed monoselective ortho halogenation of C–H bonds assisted by counter cations: a complementary method to directed ortho lithiation. Angew. Chem. Int. Ed. 47, 5215–5219 (2008).

    Article  CAS  Google Scholar 

  35. Stompor-Gorący, M., Bajek-Bil, A., Potocka, N. & Zawlik, I. Therapeutic perspectives of aminoflavonoids—a review. Int. J. Mol. Sci. 26, 2014 (2025).

    Article  PubMed  PubMed Central  Google Scholar 

  36. Díaz, M. T., Cobas, A., Guitián, E. & Castedo, L. Polar control of the regioselectivity of hetaryne cycloadditions. synthesis of ellipticine. Synlett 1998, 157–158 (1998).

    Article  Google Scholar 

  37. Díaz, M., Cobas, A., Guitián, E. & Castedo, L. Synthesis of ellipticine by hetaryne cycloadditions—control of regioselectivity. Eur. J. Org. Chem. 2001, 4543–4549 (2001).

    Article  Google Scholar 

  38. Goetz, A. E. & Garg, N. K. Regioselective reactions of 3,4-pyridynes enabled by the aryne distortion model. Nat. Chem. 5, 54–60 (2013).

    Article  PubMed  CAS  Google Scholar 

  39. Marshall, C. M., Federice, J. G., Bell, C. N., Cox, P. B. & Njardarson, J. T. An update on the nitrogen heterocycle compositions and properties of U.S. FDA-approved pharmaceuticals (2013–2023). J. Med. Chem. 67, 11622–11655 (2024).

    Article  PubMed  CAS  Google Scholar 

  40. Bureš, F. Fundamental aspects of property tuning in push–pull molecules. RSC Adv. 4, 58826–58851 (2014).

    Article  ADS  Google Scholar 

  41. Romero, N. A. & Nicewicz, D. A. Organic photoredox catalysis. Chem. Rev. 116, 10075–10166 (2016).

    Article  PubMed  CAS  Google Scholar 

  42. Twilton, J. et al. The merger of transition metal and photocatalysis. Nat. Rev. Chem. 1, 0052 (2017).

    Article  CAS  Google Scholar 

  43. Chan, A. Y. et al. Metallaphotoredox: the merger of photoredox and transition metal catalysis. Chem. Rev. 122, 1485–1542 (2022).

    Article  PubMed  CAS  Google Scholar 

  44. Buglioni, L., Raymenants, F., Slattery, A., Zondag, S. D. A. & Noël, T. Technological innovations in photochemistry for organic synthesis: flow chemistry, high-throughput experimentation, scale-up, and photoelectrochemistry. Chem. Rev. 122, 2752–2906 (2022).

    Article  PubMed  CAS  Google Scholar 

  45. Nakajima, M. et al. A direct S0→T transition in the photoreaction of heavy-atom-containing molecules. Angew. Chem. Int. Ed. 59, 6847–6852 (2020).

    Article  CAS  Google Scholar 

  46. Strieth-Kalthoff, F. & Glorius, F. Triplet energy transfer photocatalysis: unlocking the next level. Chem 6, 1888–1903 (2020).

    Article  CAS  Google Scholar 

Download references

Acknowledgements

We thank the Hoye group for use of infrared instrumentation and the Gladfelter group for use of UV–vis instrumentation. We thank A. Younis and S. S. Pullarat for help with crystallography. We thank M. Hillmyer, J. Back, M. Hintz and J. R. Lamb for help with thermogravimetric analysis and differential scanning calorimetry. We all thank the University of Minnesota for startup funding. C.C.R. acknowledges the Amgen Young Investigator Award, the BMS Unrestricted Research Grant, the Sloan Fellowship, the Dreyfus Teacher Scholar Award, the McKnight Land-Grant and 3M-Alumni Professorships. S.S.K. and C.M.S. both thank University of Minnesota for Wayland E. Noland Excellence Fellowships and Doctoral Dissertation Fellowships.

Author information

Authors and Affiliations

Authors

Contributions

Conceptualization: experimental: C.M.S., S.S.K., C.-L.Y. and C.C.R; computational: J.-N.B. and D.G. Data curation: C.M.S., S.S.K., C.-L.Y. and D.G. Formal analysis: C.M.S., S.S.K., C.-L.Y. and D.G. Funding acquisition: J.-N.B. and C.C.R. Investigation: C.M.S., S.S.K., C.L.Y. and D.G. Methodology: all authors. Project administration: J.-N.B. and C.C.R. Resources: C.M.S., S.S.K. and C.-L.Y. Supervision: J.-N.B. and C.C.R. Validation: C.M.S., S.S.K. and C.-L.Y. Writing—original draft and writing—review and editing: all authors.

Corresponding authors

Correspondence to Jan-Niklas Boyn or Courtney C. Roberts.

Ethics declarations

Competing interests

The University of Minnesota has filed a provisional patent on this work under application no. 63/886,266 with C.M.S., S.S.K., C.-L.Y. and C.C.R. as inventors for potential commercialization of reagents.

Peer review

Peer review information

Nature thanks Christopher Jones and the other, anonymous, reviewer(s) for their contribution to the peer review of this work. Peer reviewer reports are available.

Additional information

Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary information

Supplementary Information (download PDF )

All experimental procedures, characterization of new compounds, mechanistic studies and density-functional theory calculations.

Peer Review File (download PDF )

Source data

Rights and permissions

Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Seong, C.M., Kargbo, S.S., Yu, CL. et al. Myriad aryne derivatives from carboxylic acids. Nature 649, 91–97 (2026). https://doi.org/10.1038/s41586-025-09830-1

Download citation

  • Received:

  • Accepted:

  • Published:

  • Version of record:

  • Issue date:

  • DOI: https://doi.org/10.1038/s41586-025-09830-1

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing