Extended Data Fig. 4: Quality control of scRNA-seq data and sampling overview of the sex-balanced developmental transcriptional atlas of the embryonic mouse hindbrain.

a, Number of cells per replicate organized by embryonic time stage. b, Scatter plot of scaled expression of the female-specific non-coding RNA Xist and the Y-chromosome-specific gene Eif2s3y, which shows the sex assignment for female (red) and male (blue) cells. c, UMAP visualization of cell-cycle phase. d, Dot plot depicting marker genes for all cell types identified. e, Cell-type prediction using CoRAL with a previously published scRNA-seq dataset of the developing mouse cerebellum⁹ as reference.