Extended Data Fig. 8: Distribution of four common insertion sequences in various states across Y. pestis chromosomes.
From: Insights into Yersinia pestis evolution through rearrangement analysis of 242 complete genomes
Both single elements (for example, IS100 or IS1541) and combined elements (for example, ‘IS100-IS1541’, representing adjacent insertion sequences treated as a single unit) are shown (n = 242 chromosomes). Combined elements are counted separately and not included in single-element counts. Counts reflect the number of genomic fragments mapped to each insertion sequence type, irrespective of fragment length, which may result in slight differences from the copy number accumulation analyses described in the Supplementary Notes. In boxplots, the top, middle, and bottom lines indicate the 75th percentile, median, and 25th percentile, respectively. Whiskers extend to 1.5 times the interquartile range (IQR), and points beyond this range are shown as outliers.
