Extended Data Fig. 10: Haplotype analysis of ZmCRR5.
a, Identification of haplotype-specific (minimum allele frequency < 15% in one haplotype and corresponding allele frequency > 85% in other two haplotype groups) SNPs in ZmCRR5, shown as vertical lines in gray (introns), red (coding regions), and black (untranslated regions). were presented with gray, red and black vertical lines located in introns, coding regions and untranslated regions, respectively (upper). Below, details of 16 SNPs in coding regions, with allele frequencies for each haplotype group. Haplotype-specific SNPs are highlighted in bold. Violin plots displaying hundred-kernel weight (b) and pericarp thickness (c) across the three haplotype groups. P-values were determined by one-way ANOVA followed by Tukey’s multiple comparisons test.
