Table 1 List of detected enzymes involved in lignocellulose biomass degradation with their taxonomic assignments and ROI-specific localization
From: Mapping microhabitats of lignocellulose decomposition by a microbial consortium
Substrate specificity | KO number | EC number | Enzyme | Taxonomic annotation(s) | LM1 (n = 3) | LM2 (n = 3) | LM3 (n = 6) | PMM (n = 3) |
|---|---|---|---|---|---|---|---|---|
Lignin | K20929 | 1.2.3.15 | Glyoxal/methylglyoxal oxidase | Fungi | O | O | O | X |
Hemicellulose | K01181 | 3.2.1.8 | Endo-1,4-β-xylanase | Fungi/Leucoagaricus | O | X | O | X |
Hemicellulose | K01209 | 3.2.1.55 | α-l-Arabinofuranosidase | Fungi/Leucoagaricus | O | O | O | O |
Hemicellulose | K15920 | 3.2.1.37 | Exo-1,4-β-xylosidase | Fungi/Leucoagaricus | O | O | O | X |
Hemicellulose | K01192 | 3.2.1.25 | Exo-β-d-mannanase | Fungi | X | O | O | X |
Hemicellulose | K19355 | 3.2.1.78 | Endo-1,4-β-mannanase | Fungi | X | O | X | X |
Hemicellulose | K07407 | 3.2.1.22 | α-Galactosidase | Leucoagaricus | X | O | O | X |
Hemicellulose/cellulose | K05349 | 3.2.1.21 | β-Glucosidase | Fungi/Leucoagaricus | O | O | O | X |
Starch | K01178 | 3.2.1.3 | Glucoamylase | Fungi/Leucoagaricus | O | O | O | X |
Pectin | K01051 | 3.1.1.11 | Pectinesterase | Fungi/Leucoagaricus | O | O | O | X |
Pectin | K01728 | 4.2.2.2 | Pectate lyase | Fungi/Leucoagaricus | O | O | O | O |
Pectin | K18195 | 4.2.2.23 | Rhamnogalacturonan endolyase | Fungi/Leucoagaricus | X | O | O | X |
Pectin | K01213 | 3.2.1.67 | Galacturan 1,4-α-galacturonidase | Fungi | X | O | O | X |
Pectin | K15530 | 3.1.1.86 | Rhamnogalacturonan acetylesterase | Fungi/Leucoagaricus | O | O | O | X |
Pectin | K18106 | 1.1.1.- | d-Galacturonate reductase | Fungi/Leucoagaricus | O | O | O | X |
Cellulose | K01179 | 3.2.1.4 | Endoglucanase | Fungi/Leucoagaricus | O | O | O | X |
Cellulose | K01225 | 3.2.1.91 | Cellulose 1,4-β-cellobiosidase | Fungi/Leucoagaricus | O | O | O | X |
Chitin | K01183 | 3.2.1.14 | Chitinase | Fungi/Arthropodaa | O | O | O | O |
