Extended Data Fig. 7: Integration of snRNA-Seq and scRNA-Seq data in low-dimensional space. | Nature Medicine

Extended Data Fig. 7: Integration of snRNA-Seq and scRNA-Seq data in low-dimensional space.

From: A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features

Extended Data Fig. 7: Integration of snRNA-Seq and scRNA-Seq data in low-dimensional space.

a) UMAPs depicting all observations from the sc/snRNA-Seq data based on their unaligned, BBKNN integrated, or Harmony integrated, dimensionality-reduced transcriptomes. Colored by method, Leiden clusters (resolution: 0.4), samples, and cell types. Samples from the same patient are marked.

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