Extended Data Fig. 2: scMultiSim simulates batch effects and unspliced counts with RNA velocity. | Nature Methods

Extended Data Fig. 2: scMultiSim simulates batch effects and unspliced counts with RNA velocity.

From: scMultiSim: simulation of single-cell multi-omics and spatial data guided by gene regulatory networks and cell–cell interactions

Extended Data Fig. 2

(a) The observed RNA counts in dataset MD9a with added technical noise and batch effects. (b) The spliced true counts, unspliced true counts, and the RNA velocity ground truth from dataset V. The velocity vectors point to the directions of differentiation indicated by red arrows, from the tree root to leaves.

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