Extended Data Fig. 1: Data-driven HPC domain annotations derived from spatial clustering (PRECAST k = 18) across all n = 36 Visium-H&E samples. | Nature Neuroscience

Extended Data Fig. 1: Data-driven HPC domain annotations derived from spatial clustering (PRECAST k = 18) across all n = 36 Visium-H&E samples.

From: An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus

Extended Data Fig. 1

Spatial clustering results from PRECAST k = 18 were annotated to HPC spatial domains by examining marker gene expression and anatomical location. From the 18 PRECAST clusters we generated 16 spatial domains by merging clusters that were annotated to the same HPC subfields. Spot color indicates the final spatial domain annotation (legend in bottom right). See Supplementary Table 2 for abbreviations. Capture areas are grouped by donor number.

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