Table 2 Statistics of assembly in our study (NWIPB_Pahodg_1.0) and the one released in 2013 (PHO1.0).
From: A high-quality chromosome-level reference genome assembly of Tibetan antelope (Pantholops hodgsonii)
Assemblies | NWIPB_Pahodg_1.0 | PHO1.0 |
|---|---|---|
Genome size | 3.1 Gb | 2.7 Gb |
Total ungapped length | 3.1 Gb | 2.5 Gb |
Number of chromosomes | 31 | 0 |
Number of organelles | 1 | 1 |
Number of scaffolds | 540 | 15,058 |
Maximal scaffold length | 163.2 Mb | 7.6 Mb |
Scaffold N90 | 40.8 Mb | 0.7 Mb |
Scaffold N50 | 92.2 Mb | 2.8 Mb |
Scaffold L50 | 14 | 295 |
Number of contigs | 558 | 298,127 |
Contig N50 | 84.6 Mb | 18.7 kb |
Contig L50 | 15 | 39,425 |
GC percent | 45 | 42 |
Genome coverage | 35.8x | 67.0x |
Assembly level | Chromosome | Scaffold |
