Table 5 Classification of ncRNAs in three geographical stocks of L. crocea genomes.
ncRNA type | Nanhai | Mindong | Daiqu | ||||||
|---|---|---|---|---|---|---|---|---|---|
Number | Length (bp) | Proportion in Genome (%) | Number | Length (bp) | Proportion in Genome (%) | Number | Length (bp) | Proportion in Genome (%) | |
tRNA | 7,110 | 520,052 | 0.072 | 6,206 | 460,261 | 0.065 | 6,331 | 470,611 | 0.067 |
miRNA | 1,699 | 119,826 | 0.017 | 2,032 | 142,822 | 0.020 | 2,085 | 146,432 | 0.021 |
rRNA | 23,465 | 3,270,910 | 0.453 | 11,805 | 1,483,551 | 0.210 | 15,114 | 1,828,122 | 0.259 |
snRNA | 1,305 | 194,613 | 0.027 | 1,109 | 166,645 | 0.024 | 960 | 134,608 | 0.019 |
lncRNA | 4 | 660 | 0.000 | 4 | 660 | 0.000 | 3 | 597 | 0.000 |
