Table 3 Mapping ratio of short reads and PacBio HiFi reads on the MN genome assembly.
From: Chromosome-level genome assembly of Malus niedzwetzkyana, the mother of Rosybloom crabapple
Data type | Mapping rate (%) | Average sequencing depth | Coverage (%) | Coverage (> = 5×, %) | Coverage (> = 10×, %) | Coverage (> = 20×, %) |
|---|---|---|---|---|---|---|
short reads | 99.32 | 55.18 | 99.94 | 99.92 | 99.87 | 98.97 |
PacBio HiFi reads | 99.95 | 42.75 | 99.99 | 99.89 | 99.79 | 96.34 |
