Table 8 Number of noncoding RNA genes in the MN genome assembly.
From: Chromosome-level genome assembly of Malus niedzwetzkyana, the mother of Rosybloom crabapple
Type | Copy | Average length (bp) | Total length (bp) | % of genome | |
|---|---|---|---|---|---|
miRNA | 152 | 126.454 | 19,221 | 0.003 | |
tRNA | 770 | 75.491 | 58,128 | 0.009 | |
rRNA | rRNA | 3,074 | 2095.789 | 6,442,455 | 0.958 |
18S | 1,038 | 1809.780 | 1,878,552 | 0.279 | |
28S | 1,068 | 4167.157 | 4,450,524 | 0.662 | |
5S | 968 | 117.127 | 113,379 | 0.017 | |
snRNA | snRNA | 355 | 123.803 | 43,950 | 0.007 |
CD-box | 175 | 106.080 | 18,564 | 0.003 | |
HACA-box | 37 | 130.784 | 4,839 | 0.001 | |
splicing | 143 | 143.685 | 20,547 | 0.003 | |
scaRNA | 0 | — | 0 | — | |
