Table 1 Node and relationship statistics for HSCLO38, detailing the hierarchical organization of chromosomal locations in the GRCh38 genome assembly. The table includes counts for nodes at each genomic resolution level (1 Mbp, 100 kbp, 10 kbp, and 1 kbp) and their corresponding hierarchical (“above”) and positional (“precedes”) relationships for chromosomes 1–22, X, Y, and mtDNA.
Chromosome | 1Mbp nodes | 100kbp nodes | 10kbp nodes | 1kbp nodes | above_1Mbp_band | above_100kbp_band | above_10kbp_band | above_1kbp_band | precedes_1Mbp_band | precedes_100kbp_band | precedes_10kbp_band | preceedes_1kbp_band |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 249 | 2490 | 24896 | 248957 | 249 | 2490 | 24896 | 248957 | 248 | 2489 | 24895 | 248956 |
2 | 243 | 2422 | 24220 | 242194 | 243 | 2422 | 24220 | 242194 | 242 | 2421 | 24219 | 242193 |
3 | 199 | 1983 | 19830 | 198296 | 199 | 1983 | 19830 | 198296 | 198 | 1982 | 19829 | 198295 |
4 | 191 | 1903 | 19022 | 190215 | 191 | 1903 | 19022 | 190215 | 190 | 1902 | 19021 | 190214 |
5 | 182 | 1816 | 18154 | 181539 | 182 | 1816 | 18154 | 181539 | 181 | 1815 | 18153 | 181538 |
6 | 171 | 1709 | 17081 | 170806 | 171 | 1709 | 17081 | 170806 | 170 | 1708 | 17080 | 170805 |
7 | 160 | 1594 | 15935 | 159346 | 160 | 1594 | 15935 | 159346 | 159 | 1593 | 15934 | 159345 |
8 | 146 | 1452 | 14514 | 145139 | 146 | 1452 | 14514 | 145139 | 145 | 1451 | 14513 | 145138 |
9 | 139 | 1384 | 13840 | 138395 | 139 | 1384 | 13840 | 138395 | 138 | 1383 | 13839 | 138394 |
10 | 134 | 1338 | 13380 | 133798 | 134 | 1338 | 13380 | 133798 | 133 | 1337 | 13379 | 133797 |
11 | 136 | 1351 | 13509 | 135087 | 136 | 1351 | 13509 | 135087 | 135 | 1350 | 13508 | 135086 |
12 | 134 | 1333 | 13328 | 133276 | 134 | 1333 | 13328 | 133276 | 133 | 1332 | 13327 | 133275 |
13 | 115 | 1144 | 11437 | 114365 | 115 | 1144 | 11437 | 114365 | 114 | 1143 | 11436 | 114364 |
14 | 108 | 1071 | 10705 | 107044 | 108 | 1071 | 10705 | 107044 | 107 | 1070 | 10704 | 107043 |
15 | 102 | 1020 | 10200 | 101992 | 102 | 1020 | 10200 | 101992 | 101 | 1019 | 10199 | 101991 |
16 | 91 | 904 | 9034 | 90339 | 91 | 904 | 9034 | 90339 | 90 | 903 | 9033 | 90338 |
17 | 84 | 833 | 8326 | 83258 | 84 | 833 | 8326 | 83258 | 83 | 832 | 8325 | 83257 |
18 | 81 | 804 | 8038 | 80374 | 81 | 804 | 8038 | 80374 | 80 | 803 | 8037 | 80373 |
19 | 59 | 587 | 5862 | 58618 | 59 | 587 | 5862 | 58618 | 58 | 586 | 5861 | 58617 |
20 | 65 | 645 | 6445 | 64445 | 65 | 645 | 6445 | 64445 | 64 | 644 | 6444 | 64444 |
21 | 47 | 468 | 4671 | 46710 | 47 | 468 | 4671 | 46710 | 46 | 467 | 4670 | 46709 |
22 | 51 | 509 | 5082 | 50819 | 51 | 509 | 5082 | 50819 | 50 | 508 | 5081 | 50818 |
X | 157 | 1561 | 15605 | 156041 | 157 | 1561 | 15605 | 156041 | 156 | 1560 | 15604 | 156040 |
Y | 58 | 573 | 5723 | 57228 | 58 | 573 | 5723 | 57228 | 57 | 572 | 5722 | 57227 |
mtDNA | 0 | 0 | 2 | 17 | — | — | — | 17 | — | - | 1 | 16 |