Table 1 Node and relationship statistics for HSCLO38, detailing the hierarchical organization of chromosomal locations in the GRCh38 genome assembly. The table includes counts for nodes at each genomic resolution level (1 Mbp, 100 kbp, 10 kbp, and 1 kbp) and their corresponding hierarchical (“above”) and positional (“precedes”) relationships for chromosomes 1–22, X, Y, and mtDNA.

From: Homo Sapiens Chromosomal Location Ontology: A Framework for Genomic Data in Biomedical Knowledge Graphs

Chromosome

1Mbp nodes

100kbp nodes

10kbp nodes

1kbp nodes

above_1Mbp_band

above_100kbp_band

above_10kbp_band

above_1kbp_band

precedes_1Mbp_band

precedes_100kbp_band

precedes_10kbp_band

preceedes_1kbp_band

1

249

2490

24896

248957

249

2490

24896

248957

248

2489

24895

248956

2

243

2422

24220

242194

243

2422

24220

242194

242

2421

24219

242193

3

199

1983

19830

198296

199

1983

19830

198296

198

1982

19829

198295

4

191

1903

19022

190215

191

1903

19022

190215

190

1902

19021

190214

5

182

1816

18154

181539

182

1816

18154

181539

181

1815

18153

181538

6

171

1709

17081

170806

171

1709

17081

170806

170

1708

17080

170805

7

160

1594

15935

159346

160

1594

15935

159346

159

1593

15934

159345

8

146

1452

14514

145139

146

1452

14514

145139

145

1451

14513

145138

9

139

1384

13840

138395

139

1384

13840

138395

138

1383

13839

138394

10

134

1338

13380

133798

134

1338

13380

133798

133

1337

13379

133797

11

136

1351

13509

135087

136

1351

13509

135087

135

1350

13508

135086

12

134

1333

13328

133276

134

1333

13328

133276

133

1332

13327

133275

13

115

1144

11437

114365

115

1144

11437

114365

114

1143

11436

114364

14

108

1071

10705

107044

108

1071

10705

107044

107

1070

10704

107043

15

102

1020

10200

101992

102

1020

10200

101992

101

1019

10199

101991

16

91

904

9034

90339

91

904

9034

90339

90

903

9033

90338

17

84

833

8326

83258

84

833

8326

83258

83

832

8325

83257

18

81

804

8038

80374

81

804

8038

80374

80

803

8037

80373

19

59

587

5862

58618

59

587

5862

58618

58

586

5861

58617

20

65

645

6445

64445

65

645

6445

64445

64

644

6444

64444

21

47

468

4671

46710

47

468

4671

46710

46

467

4670

46709

22

51

509

5082

50819

51

509

5082

50819

50

508

5081

50818

X

157

1561

15605

156041

157

1561

15605

156041

156

1560

15604

156040

Y

58

573

5723

57228

58

573

5723

57228

57

572

5722

57227

mtDNA

0

0

2

17

17

-

1

16