Table 4 Repeats elements statistics in genomes of Arhopalus rusticus using RepeatMasker.
Item | Number of elements | Length occupied (bp) | Percentage of sequence (%) |
|---|---|---|---|
Retroelements | 473,405 | 250,765,115 | 19.67 |
SINEs | 6,475 | 2,532,426 | 0.2 |
LINEs | 304,805 | 145,658,771 | 11.42 |
LTR elements | 162,125 | 102,573,918 | 8.04 |
DNA transposons | 272,785 | 118,399,083 | 9.29 |
Rolling-circles | 25,962 | 8,314,355 | 0.65 |
Unclassified | 1,610,027 | 512,682,691 | 40.21 |
Total interspersed repeats | NA | 881,846,889 | 69.16 |
Small RNA | 0 | 0 | 0 |
Satellites | 487 | 31,099 | 0 |
Simple repeats | 11,473 | 659,592 | 0.05 |
Low complexity | 0 | 0 | 0 |
