Table 4 Statistics of predicted protein-coding genes in P. stellatus.
From: Chromosome-level genome assembly of starry flounder (Platichthys stellatus)
Gene set | Gene number | Average gene length (bp) | Average CDS length (bp) | Average exon per gene | Average exon length (bp) | Average intron length (bp) | |
|---|---|---|---|---|---|---|---|
Denovo | Genscan | 26,811 | 15,445 | 1,538 | 8.82 | 174.28 | 1,778 |
AUGUSTUS | 32,649 | 9,700 | 1,261 | 7.13 | 176.85 | 1,377 | |
Homolog | A. ocellaris | 41,708 | 13,819 | 1,206 | 6.74 | 178.85 | 2,195 |
A. testudineus | 40,932 | 14,843 | 1,241 | 6.86 | 180.75 | 2,320 | |
P. olivaceus | 46,033 | 12,089 | 1,092 | 6.20 | 175.96 | 2,113 | |
A. polyacanthus | 44,360 | 13,082 | 1,132 | 6.37 | 177.75 | 2,225 | |
C. semilaevis | 40,351 | 14,101 | 1,197 | 6.77 | 176.88 | 2,237 | |
trans.orf/RNAseq | 16,920 | 20,058 | 1,992 | 12.23 | 374.29 | 1,378 | |
MAKER | 22,835 | 17,169 | 1,636 | 10.06 | 323.00 | 1,535 | |
