Table 10 Annotation results of non-coding RNA.
From: De novo genome assembly of Yanbian cattle using PacBio HiFi and Hi-C combined with RNA-seq data
Type | miRNA | tRNA | rRNA | snRNA | |||||
|---|---|---|---|---|---|---|---|---|---|
18S | 28S | 5S | CD-box | HACA-box | splicing | scaRNA | |||
Copy | 982 | 269330 | 14 | 14 | 2918 | 199 | 364 | 1201 | 31 |
Average length(bp) | 78.491853 | 73.284547 | 1994.1429 | 7757.6429 | 115.38897 | 108.99497 | 135.5164835 | 113.85928 | 166.29032 |
Total length(bp) | 77079 | 19737727 | 27918 | 108607 | 336705 | 21690 | 49328 | 136745 | 5155 |
percent of genome (%) | 0.26% | 67.49% | 0.10% | 0.37% | 1.15% | 0.07% | 0.17% | 0.47% | 0.02% |
