Table 2 Summary of gene annotation hits from different tools.
Feature | DE | SWE | DE-SWE | |||
|---|---|---|---|---|---|---|
Unique | Total | Unique | Total | Unique | Total | |
Transcripts | 545,059 | 545,059 | 758,632 | 758,632 | 1,123,011 | 1,123,011 |
BLASTx hits | 48,506 | 49,407 | 57,928 | 59,003 | 98,785 | 100,558 |
BLASTx GO | 17,980 | 49,074 | 19,232 | 58,523 | 27,010 | 99,838 |
Proteins | 59,958 | 66,296 | 75,331 | 83,892 | 123,828 | 133,595 |
Transmembrane regions | 4,215 | 66,296 | 4,472 | 83,892 | 6,815 | 133,595 |
KEGG | 18,902 | 38,741 | 20,537 | 46,581 | 29,894 | 79,525 |
BLASTp hits | 23,443 | 27,040 | 27,493 | 32,168 | 47,302 | 52,517 |
BLASTp GO | 10,826 | 26,870 | 11,376 | 31,934 | 17,194 | 52,171 |
Pfam hits | 29,623 | 34,104 | 33,659 | 39,680 | 57,639 | 64,454 |
Signal peptides | 10,294 | 66,296 | 12,514 | 83,892 | 16,472 | 133,595 |
eggnog | 790 | 1,725 | 1,073 | 2,464 | 1,246 | 3,770 |
non-coding RNA | 1,181 | 1,194 | 1,597 | 1,628 | 2,586 | 2,623 |
