Table 1 Genomic assembly statistics of 18 Vibrio strains.
From: Complete genome sequencing of 18 urea-utilizing Vibrio strains isolated from coral
SampleID | Host* | Q30(%) | Coverage (X) | Genome Size (bp) | Scaffold Length (bp) | Scaffold Number | Scaffold N50 (bp) | Contig Length (bp) | GC content (%) |
|---|---|---|---|---|---|---|---|---|---|
V. harveyi-1 | g h | 90.41 | 132.7 | 6059542 | 6059542 | 37 | 547674 | 6059062 | 44.85 |
V. harveyi-2 | a g | 90.34 | 143.6 | 5663308 | 5663308 | 43 | 421594 | 5663308 | 44.98 |
V. harveyi-3 | b | 90.28 | 147.1 | 5626551 | 5626551 | 29 | 794192 | 5626551 | 44.97 |
V. harveyi-4 | a | 90.86 | 152.2 | 5731887 | 5731887 | 31 | 801928 | 5731887 | 44.91 |
V. harveyi-5 | a b | 90.54 | 147.0 | 5735749 | 5735749 | 29 | 788520 | 5735749 | 44.96 |
V. harveyi-6 | a e h | 90.36 | 154.5 | 5730544 | 5730544 | 30 | 801671 | 5730544 | 44.91 |
V. harveyi-7 | b | 90.44 | 152.2 | 5699361 | 5699361 | 30 | 810654 | 5699361 | 44.94 |
V. harveyi-8 | h | 91.04 | 136.2 | 5839552 | 5839552 | 38 | 419537 | 5838540 | 44.89 |
V. campbellii | a | 90.28 | 148.7 | 5657501 | 5657501 | 61 | 213049 | 5657501 | 45.51 |
V. rotiferianus-1 | g | 90.94 | 150.1 | 5344753 | 5344753 | 38 | 800726 | 5344753 | 44.76 |
V. rotiferianus-2 | a d e h | 90.32 | 155.7 | 5240905 | 5240905 | 35 | 465690 | 5240905 | 44.78 |
V. rotiferianus-3 | h | 90.65 | 152.2 | 5291095 | 5291095 | 28 | 956834 | 5290940 | 44.76 |
V. rotiferianus-4 | g | 90.49 | 161.4 | 5341692 | 5341692 | 41 | 798946 | 5341692 | 44.75 |
V. natriegens | h | 89.71 | 159.3 | 5255993 | 5255993 | 22 | 836216 | 5255833 | 44.64 |
V. owensii-1 | c | 90.34 | 133.9 | 5859886 | 5859886 | 46 | 454603 | 5859886 | 45.60 |
V. owensii-2 | c | 93.62 | 131.2 | 5863737 | 5863737 | 46 | 332690 | 5863737 | 45.61 |
V. owensii-3 | c | 89.40 | 149.6 | 5862564 | 5862564 | 47 | 454603 | 5862564 | 45.60 |
V. jasicida | f | 87.93 | 122.9 | 6275984 | 6275984 | 345 | 282135 | 6275984 | 45.94 |
