Table 5 Statistics of non-coding RNA annotation results in L. pauciflora genome.
From: A high-quality chromosome-level genome assembly of herbaceous bamboo species Lithachne pauciflora
Type | Copy | Average length (bp) | Total length (bp) | % of genome | |
|---|---|---|---|---|---|
miRNA | 801 | 189 | 151,593 | 0.009 | |
tRNA | 2,415 | 74 | 179,171 | 0.011 | |
rRNA | rRNA | 5,386 | 1,169 | 5,893,967 | 0.347 |
18S | 1,179 | 1,614 | 1,903,526 | 0.112 | |
28S | 1,296 | 2,788 | 3,613,119 | 0.213 | |
5.8S | 876 | 155 | 135,785 | 0.008 | |
5S | 2,035 | 119 | 241,537 | 0.014 | |
snRNA | snRNA | 2,764 | 111 | 294,127 | 0.017 |
CD-box | 704 | 106 | 78,034 | 0.005 | |
HACA-box | 8 | 112 | 895 | 0.000 | |
splicing | 1,451 | 95 | 137,164 | 0.008 | |
scaRNA | 601 | 130 | 78,034 | 0.005 | |