Table 3 Transposable element (TE) information from genome annotation.

From: Haplotype-resolved genome assembly of the leading cultivar of jujube (Ziziphus jujuba Mill. ‘Huizao’)

 

Hap1

Hap2

Length (bp)

% in genome

Length (bp)

% in genome

DNA

27,006,928

7.28

28,494,608

7.39

LINE

4,191,657

1.13

4,341,941

1.13

SINE

17,363

0.00

17,375

0.00

LTR/Copia

27,785,634

7.48

29,831,170

7.74

LTR/Gypsy

60,709,017

16.35

65,287,729

16.94

Rolling-circles

4,669,087

1.26

5,053,122

1.31

Unclassified

57,169,592

15.40

59,837,417

15.53

Small RNA

3,029,258

0.82

3,526,587

0.91

Satellites

57,505

0.02

60,257

0.02

Simple repeats

8,817,084

2.38

8,926,939

2.32

Low complexity

1,880,891

0.51

1,904,836

0.49

Total

203,396,803

54.79

215,339,572

55.87

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