Table 4 Classification and statistics of repetitive sequences in the E. rhadinum genome.
Type | Length (Bp) | % of genome | |
|---|---|---|---|
Retro | LTR/Copia | 931,313 | 0.16 |
LTR/Gypsy | 6,141,659 | 1.05 | |
LTR/Other | 16,317,350 | 2.78 | |
SINE | 2,747,941 | 0.47 | |
LINE | 36,609,477 | 6.24 | |
Other | 0 | 0.0 | |
DNA | EnSpm | 9,985,170 | 1.70 |
Ha rbinger | 4,415,626 | 0.75 | |
Hat | 16,039,259 | 2.73 | |
Helitron | 6,091,134 | 1.04 | |
Mariner | 353,861 | 0.06 | |
MuDR | 1,312,645 | 0.22 | |
P | 1,258,372 | 0.21 | |
Other | 35,950,310 | 6.13 | |
Other | / | 4,103,187 | 0.70 |
Unknown | / | 8,544,483 | 1.46 |
Total | / | 108,757,216 | 18.53 |