Table 2 Summary of the haplotype-resolved genome assembly for Clarias macrocephalus.
From: Chromosome-scale, haplotype-resolved genome of Bighead catfish for conservation and aquaculture
Features | Haplotype 1 | Haplotype 2 |
|---|---|---|
Overall quality | x.y.P.Q.C 6.30.P7.53.Q48.C94.25 | x.y.P.Q.C 6.30.P7.53.Q48.C94.25 |
Genome size (Mb) | 875 | 880 |
Number of pseudo-chromosomes | 27 | 27 |
Mitochondrial genome assembly (bp) | 16,510 | N/A |
NG50 of contigs (Mb) | 3 | 3 |
N50 of scaffolds (Mb) | 33.48 | 33.48 |
LG50/LG90 of scaffolds | 11/24 | 11/24 |
Number of gaps | 398 | 540 |
GC content (%) | 39.3 | 39.3 |
Complete BUSCOs N (%) | 93.0 | 93.5 |
Median QV (Merqury k21) | 42.99 | 43.33 |
Genome completeness (Merqury k21) | 89.1141 | 88.88 |
