Table 1 Comparison of B. lactea genomic quality between the past version and this study.
From: An improved chromosome-level genome assembly of a deep-sea limpet (Bathyacmaea lactea)
Statistics | B. lactea (this study) | B. lactea (Liu et al.)24 |
|---|---|---|
Platform | Illumina + PacBio + Hi-C | Nanopore + BGI |
Assembly level | Chromosome | Contig |
Genome size (Mb) | 769.8 | 754.3 |
Raw data of short reads sequencing (Gb) | 36.95 | 77.9 |
Sequencing depth of long-read | 124.65× | 68.9× |
Raw data of long reads sequencing (Gb) | 105.13 | 54.6 |
Sequencing depth of short-read | 43.81× | 98.3× |
Contig N50 (Kb) | 1,265 | 1,568 |
Scaffold N50 (Mb) | 82.05 | \ |
Number of contigs | 5,527 | 3,720 |
Number of scaffolds | 1,161 | \ |
Hi-C anchored rate (%) | 95.22 | \ |
Number of protein-coding genes | 21,122 | 23,574 |
Complete BUSCOs (%) | 96.9 | 94.3 |
Repeated sequences (%) | 61.66 | 61.4 |
