Table 8 Comparative quality assessment of the two haplotype-resolved assemblies and three previously published assemblies of T. anak.

From: Telomere-to-telomere haplotype-resolved genome assembly of a female oyster pompano (Trachinotus anak)

Assembly

Continuity

Accuracy

Completeness

Contig N50 (Mb)

Gap count

GCI score

QV scores

Mapping rate (%) (NGS/ONT/HiFi)

BUSCO scores

Telomere count

hapA

28.62

0

94.44

70.45

99.75/100.00/99.97

98.9%

48

hapB

29.02

0

85.16

68.66

99.73/100.00/99.96

99.0%

48

Luo et al., 2024 (female)

2.99

>30

99.11/-/-

97.8%

Luo et al., 2024 (male)

0.67

>30

99.20/-/-

98.3%

Guo et al., 2024

23.11

32

99.57/-/-

97.8%

GCF_046630095.1

26.5

-/-/-

99.5%