Table 4 Annotation result for SNPs in the Tibetan sheep populations.

From: Whole-genome variant of 220 Tibetan sheep from the Qinghai-Tibetan Plateau

Catcgory

AW

GB

GBB

GJ

HB

KC

OL

QK

TS

WT

ZSJ

exonic-nonsynonymous

41,250

42,044

41,674

42,614

42,354

42,955

42,439

41,065

41,376

43,687

42,013

exonic-synonymous

71,622

72,846

72,247

73,496

73,507

74,274

73,649

71,312

71,959

75,324

72,808

exonic-startloss/stopgain/loss

1,038

1,062

1,039

1,088

1,077

1,072

1,070

1,037

1,028

1,096

1,062

exonic-unknown

1,269

1,290

1,280

1,303

1,301

1,298

1,282

1,230

1,272

1,344

1,277

intronic

6,122,920

6,293,405

6,208,376

6,332,554

6,295,737

6,357,533

6,323,299

6,124,934

6,234,045

6,473,080

6,242,532

splicing

483

477

482

492

491

498

485

470

481

504

487

UTR3/UTR5

2

2

2

2

2

2

2

2

2

2

2

up/downstream

201,370

205,852

203,485

208,194

207,676

208,614

207,457

201,088

203,951

212,304

204,694

intergenic

11,917,492

12,231,525

12,092,829

12,350,508

12,227,833

12,318,005

12,310,123

11,936,580

12,154,590

12,572,495

12,156,930

Total SNPs

18,357,446

18,848,503

18,621,414

19,010,251

18,849,978

19,004,251

18,959,806

18,377,718

18,708,704

19,379,836

18,721,805