Table 5 Percentages of different kinds of sequencing reads mapped to the C. yunnanensis genome.
From: A chromosome-level reference genome of an endangered plant Craigia yunnanensis
Reads Type | Samples | Clean reads | Q20 Rate | Q30 Rate | Properly mapped |
|---|---|---|---|---|---|
Illumina pair-end reads for genome | short reads | 623590590 | 97.90% | 93.89% | 621378799 (99.64%) |
Pacbio HiFi reads for genome | HiFi reads | 2525642 | 95.15% | 88.82% | 2523387 (99.91%) |
