Table 4 Statistics of repeat elements in the genome of Morus macroura.
Class | Order | Number of elements | Length of sequence(bp) | Percentage of sequence(%) |
|---|---|---|---|---|
ClassI | 312109 | 119731608 | 37.58 | |
LINE | 36103 | 7905313 | 2.48 | |
LTR | 272632 | 111241877 | 34.92 | |
SINE | 3374 | 584418 | 0.18 | |
ClassII | 226354 | 43031387 | 13.51 | |
DNA | 210542 | 39490530 | 12.4 | |
RC | 12260 | 2562900 | 0.8 | |
MITE | 3552 | 977957 | 0.31 | |
Total TEs | 538463 | 162762995 | 51.09 | |
Tandem Repeats | 93686 | 3468047 | 1.09 | |
tandem_repeat | 50263 | 2881217 | 0.9 | |
SSR | 43423 | 586830 | 0.18 | |
Satellites | 780 | 156376 | 0.05 | |
Unknown | 38111 | 6723662 | 2.11 | |
Simple repeats | 2063 | 214688 | 0.07 | |
Low complexity | 135 | 13097 | 0 | |
Other | 15 | 1766 | 0 | |
Total Repeats | 673253 | 173340631 | 54.41 |
