Fig. 2 | Scientific Reports

Fig. 2

From: Rhizosphere microbiomes derived from vermicompost alter gene expression and regulatory pathways in tomato (Solanum lycopersicum, L.)

Fig. 2

(A) Principle coordinates analysis (PCoA) comparing rhizosphere bacterial communities in the vermicompost (V), sterile vermicompost (SV), and control (C) treatments at harvest with 95% confidence intervals around each treatment group and PERMANOVA analyzing the effect of inoculant treatment on community composition. (B) Comparison of mean Shannon diversity indexes between treatments at harvest. Letters represent pairwise comparison of group means using emmeans. (C) Comparison of the relative abundances of the most abundant bacterial phyla between treatments at harvest. (D) Comparison of the relative abundances of the most abundant bacterial classes between treatments at harvest. For all analyses, each treatment had n = 5 replicates.

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